RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 NUP35Q8NFH5 326 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 CRISP2P16562 243 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 OR10AG1Q8NH19 301 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 SAMD10Q9BYL1 202 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 A0A0J9YY99 117 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 CRYGDP07320 174 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 HINT1P49773 126 aaPredicted RBP6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 FOXA3P55318 350 aaPredicted RBP6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 FAM222AQ5U5X8 452 aa6.29□□□□□ -1.4
CACNA1A-254ENST00000637952 A8MWV9 139 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 MIFP14174 115 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 UBE2DNLQ8IWF7 75 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 MTURNQ8N3F0 131 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 SPANXB1Q9NS25 103 aaPredicted RBP6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 LOC107984640A0A0U1RRK4 108 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 TMEM136Q6ZRR5 245 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 FAM231DQ6ZW35 169 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 IGHV4-28A0A0C4DH34 117 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 HLA-DQA1P01909 254 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 ATP5G1P05496 136 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 PMCHP20382 165 aa6.28□□□□□ -1.4
CACNA1A-254ENST00000637952 PRR9Q5T870 116 aa6.27□□□□□ -1.4
CACNA1A-254ENST00000637952 DPH3P1Q9H4G8 78 aa6.27□□□□□ -1.4
CACNA1A-254ENST00000637952 UQCR10Q9UDW1 63 aa6.27□□□□□ -1.4
CACNA1A-254ENST00000637952 IGLV2-11P01706 119 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 EVI2AP22794 236 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 VAMP3Q15836 100 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 Q6ZQT7 251 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 DEFB104AQ8WTQ1 72 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 TRBV6-1A0A0K0K1D8 114 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 KLLNB2CW77 178 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 ZNF561-AS1K7EIQ3 104 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 RHODO00212 210 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 MT-ND6P03923 174 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 RPL36AP83881 106 aaKnown RBP6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 LINC00322Q6ZN03 302 aaPredicted RBP6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 RPL36ALQ969Q0 106 aaKnown RBP6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
CACNA1A-254ENST00000637952 A0A096LPF7 62 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 IGKV3D-20A0A0C4DH25 116 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 K7EIL1 84 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 UBE2L6O14933 153 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 PAX4O43316 350 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 HSBP1O75506 76 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 CT83Q5H943 113 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 Q6ZTI0 123 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 SBSPONQ8IVN8 264 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 MRPL18Q9H0U6 180 aaKnown RBP6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 V9GYV3 84 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 A0A0J9YWU9 116 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 GAGE12JA6NER3 117 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 GAGE4Q13068 117 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 OR10J3Q5JRS4 329 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 RNASEKQ6P5S7 137 aaKnown RBP6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 RASL10AQ92737 203 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 KIR2DL4Q99706 377 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 PRO0461Q9UI25 63 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 XGP55808 180 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 FAM19A5Q7Z5A7 132 aaPredicted RBP6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 SPATA12Q7Z6I5 190 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
CACNA1A-254ENST00000637952 K7EP34 96 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 CRIP1P50238 77 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 FAM19A1Q7Z5A9 133 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 C1orf158Q8N1D5 194 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 TMEM18Q96B42 140 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 PRELID3AQ96N28 172 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 AMN1Q8IY45 258 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 TMEM101Q96IK0 257 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 GFRA4Q9GZZ7 299 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 MAP1LC3AQ9H492 121 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 FAM231BA6NCW3 169 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 IGLL5B9A064 214 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 NCR2O95944 276 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 PPP1R17O96001 155 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 ORMDL3Q8N138 153 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 PHLDA1Q8WV24 401 aaPredicted RBP6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 BAALCQ8WXS3 180 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 VPS13CQ709C8 3753 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 IGLV2-8P01709 118 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 IL17DQ8TAD2 202 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 ST20Q9HBF5 79 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 MSRB1Q9NZV6 116 aa6.25□□□□□ -1.41
CACNA1A-254ENST00000637952 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
CACNA1A-254ENST00000637952 EGFEM1PQ0D2K5 195 aa6.24□□□□□ -1.41
CACNA1A-254ENST00000637952 ZNRF2Q8NHG8 242 aa6.24□□□□□ -1.41
CACNA1A-254ENST00000637952 LYRM9A8MSI8 78 aa6.24□□□□□ -1.41
CACNA1A-254ENST00000637952 ATP5L2Q7Z4Y8 100 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms