RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
CACNA1D-227ENST00000637844 AGRNO00468 2067 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 A0A096LNJ9 63 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 TRBV27A0A0K0K1C4 114 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 IGHV3-53P01767 116 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 PRM2P04554 102 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 GIG44P09565 113 aaPredicted RBP4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 POLR2KP53803 58 aaKnown RBP4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 C2orf66Q6UXQ4 117 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 ZNF664Q8N3J9 261 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 Q8N976 141 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 TOMM6Q96B49 74 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 OVOL2Q9BRP0 275 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 NOP10Q9NPE3 64 aaKnown RBP4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 MUC4Q99102 2169 aa4.55□□□□□ -1.68
CACNA1D-227ENST00000637844 TRBV10-1A0A0K0K1A3 114 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 DDTP30046 118 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 RIPPLY3P57055 190 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 RPL36AP83881 106 aaKnown RBP4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 DEFA6Q01524 100 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 UFSP1Q6NVU6 142 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 Q6ZTI0 123 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 ERASQ7Z444 233 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 PRIMA1Q86XR5 153 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 ATOH7Q8N100 152 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 RPL36ALQ969Q0 106 aaKnown RBP4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 TP53TG1Q9Y2A0 90 aa4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 NSD1Q96L73 2696 aaPredicted RBP4.54□□□□□ -1.68
CACNA1D-227ENST00000637844 FN1P02751 2386 aaKnown RBP4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 C2CD3Q4AC94 2353 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 TRAV12-1A0A0B4J245 112 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 TRGV4A0A0C4DH28 118 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 GAGE12BA1L429 117 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 K7EQD1 137 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 GAGE7O76087 117 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 DPM2O94777 84 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 PLNP26678 52 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 EMP1P54849 157 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 COTL1Q14019 142 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 PAPPA-AS1Q5QFB9 102 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 NEGR1Q7Z3B1 354 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 SPATA3Q8NHX4 192 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 MIEN1Q9BRT3 115 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 SETD2Q9BYW2 2564 aaPredicted RBP4.53□□□□□ -1.68
CACNA1D-227ENST00000637844 TRBV7-3A0A075B6L6 115 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 A0A087WX48 190 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 TRBV6-4A0A1B0GX49 114 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 LYRM9A8MSI8 78 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 TSHBP01222 138 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 IGKCP01834 107 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 IGHV4-30-4P0DP06 118 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 MIFP14174 115 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 DEFB135Q30KP9 77 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 OXLD1Q5BKU9 147 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 DAZ4Q86SG3 579 aaKnown RBP4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 NEXN-AS1Q8NBZ9 246 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 OR11H2Q8NH07 326 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 ZNF479Q96JC4 524 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 TIMM17AQ99595 171 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 PMCHL2Q9BQD1 86 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 DAZ3Q9NR90 486 aaKnown RBP4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 CHTOPQ9Y3Y2 248 aaKnown RBP4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 HIVEP1P15822 2718 aa4.52□□□□□ -1.69
CACNA1D-227ENST00000637844 TEX48A0A1B0GUV7 120 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 hDV102S1A0JD36 115 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 F8VRH5 84 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 NPSP0C0P6 89 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 P0DMU3 169 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 FAM231AP0DMU4 169 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 FAM231CP0DMU5 169 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 HNRNPA3P51991 378 aaKnown RBP4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 EGFEM1PQ0D2K5 195 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 ODF1Q14990 250 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 C20orf203Q8NBC4 194 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 ZNRF2Q8NHG8 242 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 RNF183Q96D59 192 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 ZMAT4Q9H898 229 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 X6R8D5 127 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 MTORP42345 2549 aa4.51□□□□□ -1.69
CACNA1D-227ENST00000637844 A8MZ25 164 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 LINC00587B1AMM8 73 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 UBE2L6O14933 153 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 DEFB130BP0DP73 79 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 DEFB130AP0DP74 79 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 PMVKQ15126 192 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 TMEM97Q5BJF2 176 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 DGAT2L7PQ6IED9 249 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 SLC25A34Q6PIV7 304 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 Q6ZSN1 163 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 MRPL52Q86TS9 123 aaKnown RBP4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 SLC25A29Q8N8R3 303 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms