RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
LINC00643-207ENST00000637212 TNFRSF18Q9Y5U5 241 aa9.42□□□□□ -0.9
LINC00643-207ENST00000637212 H3BNG1 76 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 PAX4O43316 350 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 NPYP01303 97 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 RPL36AP83881 106 aaKnown RBP9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
LINC00643-207ENST00000637212 Q6ZTC4 211 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 RPL36ALQ969Q0 106 aaKnown RBP9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
LINC00643-207ENST00000637212 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
LINC00643-207ENST00000637212 TRAV10A0A0B4J240 114 aa9.4□□□□□ -0.9
LINC00643-207ENST00000637212 VCYO14598 125 aa9.4□□□□□ -0.9
LINC00643-207ENST00000637212 POLR2KP53803 58 aaKnown RBP9.4□□□□□ -0.9
LINC00643-207ENST00000637212 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.9
LINC00643-207ENST00000637212 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
LINC00643-207ENST00000637212 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
LINC00643-207ENST00000637212 RPL39LQ96EH5 51 aaKnown RBP9.4□□□□□ -0.9
LINC00643-207ENST00000637212 DEFB131BA0A096LNP1 70 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 P0DMU3 169 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 HTN3P15516 51 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 Q8N8P6 123 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 PRSS3P2Q8NHM4 247 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 VSIG2Q96IQ7 327 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
LINC00643-207ENST00000637212 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
LINC00643-207ENST00000637212 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
LINC00643-207ENST00000637212 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 K7EMI3 77 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 TCAPO15273 167 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 PMCHP20382 165 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
LINC00643-207ENST00000637212 SH2D6Q7Z4S9 175 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 DAZ4Q86SG3 579 aaKnown RBP9.38□□□□□ -0.91
LINC00643-207ENST00000637212 BAGE3Q86Y29 109 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 ZNRF2Q8NHG8 242 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 TMEM70Q9BUB7 260 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 DAZ3Q9NR90 486 aaKnown RBP9.38□□□□□ -0.91
LINC00643-207ENST00000637212 Q9UF83 564 aa9.38□□□□□ -0.91
LINC00643-207ENST00000637212 TRAV26-1A0A087WT03 109 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 LINC01546A6NGU7 62 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 I3L3M4 83 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 LINC00614P0C842 121 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 GYPEP15421 78 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 UBE2D3P61077 147 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 UBE2D2P62837 147 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 NIT1Q86X76 327 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 SMIM2Q9BVW6 85 aa9.37□□□□□ -0.91
LINC00643-207ENST00000637212 IGLV2-18A0A075B6J9 118 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 GAGE12JA6NER3 117 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
LINC00643-207ENST00000637212 GAGE1Q13065 139 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 GAGE4Q13068 117 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 GAGE5Q13069 117 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
LINC00643-207ENST00000637212 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 GAGE13Q4V321 117 aa9.36□□□□□ -0.91
LINC00643-207ENST00000637212 CHCHD1Q96BP2 118 aaKnown RBP9.36□□□□□ -0.91
LINC00643-207ENST00000637212 A0A0J9YY99 117 aa9.35□□□□□ -0.91
LINC00643-207ENST00000637212 LINC00694P0DN24 101 aa9.35□□□□□ -0.91
LINC00643-207ENST00000637212 NDUFA6P56556 154 aa9.35□□□□□ -0.91
LINC00643-207ENST00000637212 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
LINC00643-207ENST00000637212 PHLDA1Q8WV24 401 aaPredicted RBP9.35□□□□□ -0.91
LINC00643-207ENST00000637212 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
LINC00643-207ENST00000637212 LOC100131303A0A0U1RQF7 123 aa9.34□□□□□ -0.91
LINC00643-207ENST00000637212 S100A6P06703 90 aa9.34□□□□□ -0.91
LINC00643-207ENST00000637212 TMEM97Q5BJF2 176 aa9.34□□□□□ -0.91
LINC00643-207ENST00000637212 ATP6V0E2Q8NHE4 81 aa9.34□□□□□ -0.91
LINC00643-207ENST00000637212 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
LINC00643-207ENST00000637212 ESDP10768 282 aa9.33□□□□□ -0.92
LINC00643-207ENST00000637212 G0S2P27469 103 aa9.33□□□□□ -0.92
LINC00643-207ENST00000637212 URB1-AS1Q96HZ7 61 aa9.33□□□□□ -0.92
LINC00643-207ENST00000637212 GTSF1LQ9H1H1 148 aa9.33□□□□□ -0.92
LINC00643-207ENST00000637212 AP5S1Q9NUS5 200 aa9.33□□□□□ -0.92
LINC00643-207ENST00000637212 TENM3Q9P273 2699 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 SERF1AO75920 110 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 FCER1GP30273 86 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 COTL1Q14019 142 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 LAGE3Q14657 143 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
LINC00643-207ENST00000637212 A0A096LPF7 62 aa9.31□□□□□ -0.92
LINC00643-207ENST00000637212 TSHBP01222 138 aa9.31□□□□□ -0.92
LINC00643-207ENST00000637212 TIRAPP58753 221 aa9.31□□□□□ -0.92
LINC00643-207ENST00000637212 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms