RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 Q5PR19 223 aa11.81□□□□□ -0.52
CHRNA7-221ENST00000636898 PIK3CD-AS1Q5SR53 167 aa11.81□□□□□ -0.52
CHRNA7-221ENST00000636898 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
CHRNA7-221ENST00000636898 CSMD2Q7Z408 3487 aa11.81□□□□□ -0.52
CHRNA7-221ENST00000636898 J3QR89 54 aa11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 IGHV4-31P0DP07 118 aa11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 Q8N2B8 174 aa11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 IGHV3-30P01768 117 aa11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 RBMY1A1P0DJD3 496 aaKnown RBP11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 RBMY1CP0DJD4 496 aa11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 IGHV3-30-5P0DP03 117 aa11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 RBMY1FQ15415 496 aaKnown RBP11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 SPAG8Q99932 426 aaPredicted RBP11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 UTP20O75691 2785 aaKnown RBP11.8□□□□□ -0.52
CHRNA7-221ENST00000636898 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 LEPROTO15243 131 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 LGALS3P17931 250 aaKnown RBP11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 PYGO1Q9Y3Y4 419 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 H3BMM0 161 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 TSPAN13O95857 204 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 LYRM7Q5U5X0 104 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 DLX4Q92988 240 aaPredicted RBP11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 BEX4Q9NWD9 120 aaPredicted RBP11.79□□□□□ -0.52
CHRNA7-221ENST00000636898 IGLV4-3A0A075B6K6 122 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 CRYBA4P53673 196 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 SLURP1P55000 103 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 DEFB131AP59861 70 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 UBE2D3P61077 147 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 UBE2D2P62837 147 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 PTH2Q96A98 100 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 VCX2Q9H322 139 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 SORL1Q92673 2214 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
CHRNA7-221ENST00000636898 A8MWV9 139 aa11.77□□□□□ -0.52
CHRNA7-221ENST00000636898 PEMTQ9UBM1 199 aa11.77□□□□□ -0.52
CHRNA7-221ENST00000636898 RHODO00212 210 aa11.77□□□□□ -0.53
CHRNA7-221ENST00000636898 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.53
CHRNA7-221ENST00000636898 ETDBQ3ZM63 59 aa11.77□□□□□ -0.53
CHRNA7-221ENST00000636898 ACACBO00763 2458 aa11.77□□□□□ -0.53
CHRNA7-221ENST00000636898 CR1P17927 2039 aa11.76□□□□□ -0.53
CHRNA7-221ENST00000636898 FBN2P35556 2912 aa11.76□□□□□ -0.53
CHRNA7-221ENST00000636898 M0R2P5 195 aa11.76□□□□□ -0.53
CHRNA7-221ENST00000636898 PRRC2AP48634 2157 aaKnown RBP11.76□□□□□ -0.53
CHRNA7-221ENST00000636898 MXRA5Q9NR99 2828 aa11.76□□□□□ -0.53
CHRNA7-221ENST00000636898 APOMO95445 188 aa11.75□□□□□ -0.53
CHRNA7-221ENST00000636898 DEFB136Q30KP8 78 aa11.75□□□□□ -0.53
CHRNA7-221ENST00000636898 ZNF415Q09FC8 603 aa11.75□□□□□ -0.53
CHRNA7-221ENST00000636898 SH2D6Q7Z4S9 175 aa11.75□□□□□ -0.53
CHRNA7-221ENST00000636898 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
CHRNA7-221ENST00000636898 CREBBPQ92793 2442 aa11.75□□□□□ -0.53
CHRNA7-221ENST00000636898 RBMY1BA6NDE4 496 aaKnown RBP11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 RBMY1EA6NEQ0 496 aaKnown RBP11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 RBMY1DP0C7P1 496 aaKnown RBP11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 CFC1BP0CG36 223 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 CFC1P0CG37 223 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 C18orf65Q6ZTR6 163 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 LINC00467Q9BRT7 94 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 HTN1P15515 57 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 TMEM61Q8N0U2 210 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
CHRNA7-221ENST00000636898 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
CHRNA7-221ENST00000636898 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
CHRNA7-221ENST00000636898 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
CHRNA7-221ENST00000636898 LRRC75A-AS1Q8N1F1 130 aa11.73□□□□□ -0.53
CHRNA7-221ENST00000636898 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
CHRNA7-221ENST00000636898 TRBV20-1A0A075B6N2 111 aa11.72□□□□□ -0.53
CHRNA7-221ENST00000636898 MRPS36P82909 103 aaKnown RBP11.72□□□□□ -0.53
CHRNA7-221ENST00000636898 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
CHRNA7-221ENST00000636898 CD28P10747 220 aa11.72□□□□□ -0.53
CHRNA7-221ENST00000636898 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
CHRNA7-221ENST00000636898 FAM104AQ969W3 186 aa11.72□□□□□ -0.53
CHRNA7-221ENST00000636898 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
CHRNA7-221ENST00000636898 PSMB2P49721 201 aa11.71□□□□□ -0.53
CHRNA7-221ENST00000636898 PROK1P58294 105 aa11.71□□□□□ -0.53
CHRNA7-221ENST00000636898 DEFB113Q30KQ7 82 aa11.71□□□□□ -0.53
CHRNA7-221ENST00000636898 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.53
CHRNA7-221ENST00000636898 POLQO75417 2590 aa11.71□□□□□ -0.53
CHRNA7-221ENST00000636898 TMEM238C9JI98 176 aa11.71□□□□□ -0.54
CHRNA7-221ENST00000636898 SPATA25Q9BR10 227 aa11.71□□□□□ -0.54
CHRNA7-221ENST00000636898 NACAE9PAV3 2078 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 SPXQ9BT56 116 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 C1QTNF4Q9BXJ3 329 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 SPANXA1Q9NS26 97 aa11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 TSSC4Q9Y5U2 329 aaPredicted RBP11.7□□□□□ -0.54
CHRNA7-221ENST00000636898 SMCPP49901 116 aaPredicted RBP11.69□□□□□ -0.54
CHRNA7-221ENST00000636898 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
CHRNA7-221ENST00000636898 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
CHRNA7-221ENST00000636898 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
CHRNA7-221ENST00000636898 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
CHRNA7-221ENST00000636898 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
CHRNA7-221ENST00000636898 DEFB114Q30KQ6 69 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms