RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 IGHV4-30-2A0A087WSY4 118 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 CYSRT1A8MQ03 144 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 J3QQQ9 107 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 K7EQG2 157 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 FOXI1Q12951 378 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 CELSR2Q9HCU4 2923 aa10.78□□□□□ -0.68
CLN6-215ENST00000636674 TRBV20-1A0A075B6N2 111 aa10.77□□□□□ -0.68
CLN6-215ENST00000636674 IGHV1OR15-1A0A075B7D0 117 aa10.77□□□□□ -0.68
CLN6-215ENST00000636674 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.68
CLN6-215ENST00000636674 EDA2RQ9HAV5 297 aa10.77□□□□□ -0.68
CLN6-215ENST00000636674 MDFICQ9P1T7 246 aa10.77□□□□□ -0.68
CLN6-215ENST00000636674 ITPR2Q14571 2701 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 ZNF688P0C7X2 276 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 CFC1BP0CG36 223 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 CFC1P0CG37 223 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 INSL3P51460 131 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 ZNF56Q15929 161 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 FAM74A4Q5TZK3 123 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 Q8N1Y9 231 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.69
CLN6-215ENST00000636674 ZFHX3Q15911 3703 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 TMEM223A0PJW6 202 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 LEPROTO15243 131 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 SBSPONQ8IVN8 264 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 MAST4O15021 2626 aa10.76□□□□□ -0.69
CLN6-215ENST00000636674 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 P0DMU3 169 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 LGALS3P17931 250 aaKnown RBP10.75□□□□□ -0.69
CLN6-215ENST00000636674 GATA3P23771 443 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 ATP5J2P56134 94 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 TMEM95Q3KNT9 176 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 B4DSR2 109 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 PSMB2P49721 201 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 NOTCH2Q04721 2471 aa10.75□□□□□ -0.69
CLN6-215ENST00000636674 ABCA12Q86UK0 2595 aa10.74□□□□□ -0.69
CLN6-215ENST00000636674 AVPP01185 164 aa10.74□□□□□ -0.69
CLN6-215ENST00000636674 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
CLN6-215ENST00000636674 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
CLN6-215ENST00000636674 I3L3M4 83 aa10.74□□□□□ -0.69
CLN6-215ENST00000636674 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
CLN6-215ENST00000636674 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
CLN6-215ENST00000636674 TCL1BO95988 128 aa10.73□□□□□ -0.69
CLN6-215ENST00000636674 TEN1Q86WV5 123 aa10.73□□□□□ -0.69
CLN6-215ENST00000636674 DEFB104AQ8WTQ1 72 aa10.73□□□□□ -0.69
CLN6-215ENST00000636674 RHODO00212 210 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 APCP25054 2843 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 IGLV4-3A0A075B6K6 122 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 M0QXV9 152 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 SPINK13Q1W4C9 94 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 PPDPFLQ8WWR9 84 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 VCX2Q9H322 139 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 PYGO1Q9Y3Y4 419 aa10.72□□□□□ -0.69
CLN6-215ENST00000636674 CRYBA4P53673 196 aa10.71□□□□□ -0.69
CLN6-215ENST00000636674 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
CLN6-215ENST00000636674 CELSR1Q9NYQ6 3014 aa10.71□□□□□ -0.7
CLN6-215ENST00000636674 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 IGHV4-59P01825 116 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 OPRPNQ99935 248 aaPredicted RBP10.7□□□□□ -0.7
CLN6-215ENST00000636674 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.77e-7■■□□□ 11.4
CLN6-215ENST00000636674 DSCR9P59020 149 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 DEFB112Q30KQ8 113 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 SFTA2Q6UW10 78 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 C10orf99Q6UWK7 81 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 FBN2P35556 2912 aa10.7□□□□□ -0.7
CLN6-215ENST00000636674 A4D1N5 150 aa10.69□□□□□ -0.7
CLN6-215ENST00000636674 A8MTW9 85 aa10.69□□□□□ -0.7
CLN6-215ENST00000636674 A8MWV9 139 aa10.69□□□□□ -0.7
CLN6-215ENST00000636674 ZNF418Q8TF45 676 aaPredicted RBP10.69□□□□□ -0.7
CLN6-215ENST00000636674 TMEM263Q8WUH6 116 aaKnown RBP10.69□□□□□ -0.7
CLN6-215ENST00000636674 A0A1B0GV72 72 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 IGHV3-33P01772 117 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 CARD19Q96LW7 228 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 M0R2P5 195 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
CLN6-215ENST00000636674 ELANEP08246 267 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 PIK3CD-AS1Q5SR53 167 aa10.68□□□□□ -0.7
CLN6-215ENST00000636674 TEX15Q9BXT5 2789 aa10.67□□□□□ -0.7
CLN6-215ENST00000636674 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
CLN6-215ENST00000636674 A0A0J9YXV3 536 aa10.67□□□□□ -0.7
CLN6-215ENST00000636674 MRPS36P82909 103 aaKnown RBP10.67□□□□□ -0.7
CLN6-215ENST00000636674 FHL3Q13643 280 aa10.67□□□□□ -0.7
CLN6-215ENST00000636674 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
CLN6-215ENST00000636674 PTH2Q96A98 100 aa10.67□□□□□ -0.7
CLN6-215ENST00000636674 J3QLI3 93 aa10.66□□□□□ -0.7
CLN6-215ENST00000636674 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
CLN6-215ENST00000636674 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
CLN6-215ENST00000636674 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
CLN6-215ENST00000636674 Q5PR19 223 aa10.66□□□□□ -0.7
CLN6-215ENST00000636674 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms