RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 LIMS4P0CW20 117 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 CXCL3P19876 107 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 DYNLT3P51808 116 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 UBA52P62987 128 aaKnown RBP-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 TRAM1Q15629 374 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 BCL2L15Q5TBC7 163 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 FKBP1CQ5VVH2 108 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 DCUN1D2Q6PH85 259 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 TMEM107Q6UX40 140 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 SERP2Q8N6R1 65 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 MYOZ3Q8TDC0 251 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 LCN9Q8WX39 176 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 FAM167A-AS1Q96KT0 104 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 PPM1MQ96MI6 270 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 TRGV9Q99603 122 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 C20orf24Q9BUV8 137 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 MAP1LC3BQ9GZQ8 125 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 NT5C3AQ9H0P0 336 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 RSPH9Q9H1X1 276 aaPredicted RBP-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 DKKL1Q9UK85 242 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 V9GYH0 126 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 KIAA1107Q9UPP5 1409 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 TMEM131LA2VDJ0 1609 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 LY75O60449 1722 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 MAGI3Q5TCQ9 1506 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 CCDC171Q6TFL3 1326 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 CEP164Q9UPV0 1460 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 hCG_1818297A0A087WSY0 165 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 TRAV26-2A0A0B4J265 109 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 TRDV1A0A1B0GX56 115 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 C5orf58C9J3I9 102 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 J3QRK9 145 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 FABP7O15540 132 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 SCGB2A1O75556 95 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 GUCA1CO95843 209 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 ACYP1P07311 99 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 TMBIM6P55061 237 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 AP3S2P59780 193 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 DSTNP60981 165 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 NCALDP61601 193 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 MRPS36P82909 103 aaKnown RBP-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 ATP6V1FQ16864 119 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 TRAPPC5Q8IUR0 188 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 MMGT1Q8N4V1 131 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 LGALS14Q8TCE9 139 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 SKA1Q96BD8 255 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 TEX37Q96LM6 180 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 MGST2Q99735 147 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 SNRNP25Q9BV90 132 aaKnown RBP-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 COMMD9Q9P000 198 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 MRPS7Q9Y2R9 242 aaKnown RBP-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 LRRC37A3O60309 1634 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 UTRNP46939 3433 aa-2.11□□□□□ -2.75
CDKL5-210ENST00000636046 USP54Q70EL1 1684 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 hCG_2014768A0A024R1R8 64 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 KCNE1BA0A087WTH5 132 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 SMCO3A2RU48 225 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 H7C1C5 153 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 J3KRW8 73 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 TMEM256-PLSCR3K7ERE1 68 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 K7ERJ3 54 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 HSBP1O75506 76 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 FTH1P02794 183 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 CALB1P05937 261 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 COX7BP24311 80 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 DDTP30046 118 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 RGS8P57771 180 aaPredicted RBP-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 LCN6P62502 163 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 DNAJC3Q13217 504 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 RPL7L1Q6DKI1 246 aaKnown RBP-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 ETFRF1Q6IPR1 90 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 C4orf50Q6ZRC1 276 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 SYCE1Q8N0S2 351 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 ISOC2Q96AB3 205 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 SMIM12Q96EX1 92 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 ARPC5LQ9BPX5 153 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 PRO1933Q9H354 126 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 CHMP4BQ9H444 224 aaKnown RBP-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 MOSPD1Q9UJG1 213 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 MAPKBP1O60336 1514 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 LRRC7Q96NW7 1537 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 QRICH2Q9H0J4 1663 aa-2.12□□□□□ -2.75
CDKL5-210ENST00000636046 MYH6P13533 1939 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 ANKRD36CQ5JPF3 1778 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 RAPGEF6Q8TEU7 1601 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 A2ML1A8K2U0 1454 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 MLH3Q9UHC1 1453 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 EDC4Q6P2E9 1401 aaKnown RBP-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 TRAV2A0A0B4J234 112 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 SYCE3A1L190 88 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 LYNX1G3V0Z9 82 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 APOA1P02647 267 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 IFI6P09912 130 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 SMIM10L2AP0DMW4 78 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 SMIM10L2BP0DMW5 78 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 HIST1H1DP16402 221 aaKnown RBP-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 HMOX2P30519 316 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 ARPP19P56211 112 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 ARF5P84085 180 aa-2.13□□□□□ -2.75
CDKL5-210ENST00000636046 SMAGPQ0VAQ4 97 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms