RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 A0A1W2PPV4 95 aa11.28□□□□□ -0.6
CLN6-212ENST00000636020 GCGP01275 180 aa11.28□□□□□ -0.6
CLN6-212ENST00000636020 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
CLN6-212ENST00000636020 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
CLN6-212ENST00000636020 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
CLN6-212ENST00000636020 MED9Q9NWA0 146 aa11.28□□□□□ -0.6
CLN6-212ENST00000636020 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
CLN6-212ENST00000636020 GNG5P63218 68 aa11.27□□□□□ -0.61
CLN6-212ENST00000636020 SFT2D1Q8WV19 159 aa11.27□□□□□ -0.61
CLN6-212ENST00000636020 A0A087WWL8 130 aa11.26□□□□□ -0.61
CLN6-212ENST00000636020 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
CLN6-212ENST00000636020 RPL36AP83881 106 aaKnown RBP11.26□□□□□ -0.61
CLN6-212ENST00000636020 KHDC3LQ587J8 217 aa11.26□□□□□ -0.61
CLN6-212ENST00000636020 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
CLN6-212ENST00000636020 RPL36ALQ969Q0 106 aaKnown RBP11.26□□□□□ -0.61
CLN6-212ENST00000636020 AP5S1Q9NUS5 200 aa11.26□□□□□ -0.61
CLN6-212ENST00000636020 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
CLN6-212ENST00000636020 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 MUC21A0A0G2JKD1 596 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 A0A1B0GV50 99 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 TEX46H3BTG2 121 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 ARL14EPLP0DKL9 152 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 CCL20P78556 96 aa11.25□□□□□ -0.61
CLN6-212ENST00000636020 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 CXorf1O96002 111 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 TAS2R45P59539 299 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 NDUFA5Q16718 116 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 FAM74A4Q5TZK3 123 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
CLN6-212ENST00000636020 GCHFRP30047 84 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 PKIAP61925 76 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 COX6A2Q02221 97 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 SMUG1Q53HV7 270 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 PQLC2Q6ZP29 291 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 COMMD7Q86VX2 200 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
CLN6-212ENST00000636020 H7C1H1 209 aa11.22□□□□□ -0.61
CLN6-212ENST00000636020 STPG4Q8N801 248 aa11.22□□□□□ -0.61
CLN6-212ENST00000636020 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
CLN6-212ENST00000636020 RAB19A4D1S5 217 aa11.21□□□□□ -0.61
CLN6-212ENST00000636020 RBX1P62877 108 aa11.21□□□□□ -0.61
CLN6-212ENST00000636020 SLC7A5P1Q8MH63 180 aa11.21□□□□□ -0.61
CLN6-212ENST00000636020 OR10G8Q8NGN5 311 aa11.21□□□□□ -0.61
CLN6-212ENST00000636020 FAM210AQ96ND0 272 aa11.21□□□□□ -0.61
CLN6-212ENST00000636020 PSG8Q9UQ74 426 aa11.21□□□□□ -0.61
CLN6-212ENST00000636020 IGLV10-54A0A075B6I4 117 aa11.2□□□□□ -0.62
CLN6-212ENST00000636020 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
CLN6-212ENST00000636020 PRSS3P2Q8NHM4 247 aa11.2□□□□□ -0.62
CLN6-212ENST00000636020 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
CLN6-212ENST00000636020 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
CLN6-212ENST00000636020 FAM231BA6NCW3 169 aa11.19□□□□□ -0.62
CLN6-212ENST00000636020 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
CLN6-212ENST00000636020 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
CLN6-212ENST00000636020 TMEM167BQ9NRX6 74 aa11.19□□□□□ -0.62
CLN6-212ENST00000636020 GNG13Q9P2W3 67 aa11.19□□□□□ -0.62
CLN6-212ENST00000636020 H3BVH4 76 aa11.18□□□□□ -0.62
CLN6-212ENST00000636020 IFNA1P01562 189 aa11.18□□□□□ -0.62
CLN6-212ENST00000636020 TCRAP04437 139 aa11.18□□□□□ -0.62
CLN6-212ENST00000636020 BCL2P10415 239 aa11.18□□□□□ -0.62
CLN6-212ENST00000636020 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
CLN6-212ENST00000636020 ARL2-SNX15V9GYD0 113 aa11.18□□□□□ -0.62
CLN6-212ENST00000636020 ARMS2P0C7Q2 107 aa11.17□□□□□ -0.62
CLN6-212ENST00000636020 Q6ZRP5 223 aa11.17□□□□□ -0.62
CLN6-212ENST00000636020 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
CLN6-212ENST00000636020 FSIP2Q5CZC0 6907 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 PAGE4O60829 102 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
CLN6-212ENST00000636020 FLI1Q01543 452 aaPredicted RBP11.16□□□□□ -0.62
CLN6-212ENST00000636020 REG3AQ06141 175 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 UQCC3Q6UW78 93 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 PRNTQ86SH4 94 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 NEXN-AS1Q8NBZ9 246 aa11.16□□□□□ -0.62
CLN6-212ENST00000636020 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 FAM74A7A6NL05 159 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 K7EQM0 130 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 P01737 135 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 RPS10P46783 165 aaKnown RBP11.15□□□□□ -0.62
CLN6-212ENST00000636020 UBE2G2P60604 165 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 GAGE6Q13070 117 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
CLN6-212ENST00000636020 A0A1W2PRE2 83 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 C9JQL5 133 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 PEA15Q15121 130 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 ZNF664Q8N3J9 261 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
CLN6-212ENST00000636020 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
CLN6-212ENST00000636020 B4DEV8 164 aa11.13□□□□□ -0.63
CLN6-212ENST00000636020 SRP19P09132 144 aaKnown RBP11.13□□□□□ -0.63
CLN6-212ENST00000636020 GZMBP10144 247 aa11.13□□□□□ -0.63
CLN6-212ENST00000636020 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
CLN6-212ENST00000636020 PRR27Q6MZM9 219 aa11.12□□□□□ -0.63
CLN6-212ENST00000636020 PHLDA3Q9Y5J5 127 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms