RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ATP6V0E2Q8NHE4 81 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 LINC00477Q96M19 166 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 NBEAL1Q6ZS30 2694 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 MGAM2Q2M2H8 2515 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 H3BMG7 143 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
CLN8-209ENST00000635970 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 A0A1B0GV72 72 aa11.55□□□□□ -0.56
CLN8-209ENST00000635970 PAPPA-AS1Q5QFB9 102 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 PRO0461Q9UI25 63 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 CLEC19AQ6UXS0 136 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 SPAG8Q99932 426 aaPredicted RBP11.54□□□□□ -0.56
CLN8-209ENST00000635970 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
CLN8-209ENST00000635970 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
CLN8-209ENST00000635970 HOXD3P31249 432 aaPredicted RBP11.53□□□□□ -0.56
CLN8-209ENST00000635970 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.56
CLN8-209ENST00000635970 ETDBQ3ZM63 59 aa11.52□□□□□ -0.56
CLN8-209ENST00000635970 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.56
CLN8-209ENST00000635970 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
CLN8-209ENST00000635970 OVOL1O14753 267 aa11.52□□□□□ -0.57
CLN8-209ENST00000635970 RPL32P62910 135 aaKnown RBP11.52□□□□□ -0.57
CLN8-209ENST00000635970 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
CLN8-209ENST00000635970 VCX2Q9H322 139 aa11.52□□□□□ -0.57
CLN8-209ENST00000635970 TRBV7-9A0A0J9YWB2 115 aa11.51□□□□□ -0.57
CLN8-209ENST00000635970 H3BVH4 76 aa11.51□□□□□ -0.57
CLN8-209ENST00000635970 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
CLN8-209ENST00000635970 ARL3P36405 182 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 SMAGPQ0VAQ4 97 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 BAALCQ8WXS3 180 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 RASL10AQ92737 203 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 ASIPP42127 132 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
CLN8-209ENST00000635970 C2orf66Q6UXQ4 117 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 POM121L12Q8N7R1 296 aa11.5□□□□□ -0.57
CLN8-209ENST00000635970 UBE2D1P51668 147 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 SH2D6Q7Z4S9 175 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 MTURNQ8N3F0 131 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 GLMPQ8WWB7 406 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 CYSLTR1Q9Y271 337 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 DNAH3Q8TD57 4116 aa11.49□□□□□ -0.57
CLN8-209ENST00000635970 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 APOMO95445 188 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 S100A4P26447 101 aaKnown RBP11.48□□□□□ -0.57
CLN8-209ENST00000635970 SYNJ2BPP57105 145 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 HERVK_113P61574 105 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 PRADC1Q9BSG0 188 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
CLN8-209ENST00000635970 PHLDA3Q9Y5J5 127 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 CFAP126Q5VTH2 177 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 AMTNQ6UX39 209 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 C1QTNF4Q9BXJ3 329 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 PGPEP1Q9NXJ5 209 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 NOTCH1P46531 2555 aa11.48□□□□□ -0.57
CLN8-209ENST00000635970 PRSS29PA6NIE9 313 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 ZNF815PA8K554 130 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 FOXI1Q12951 378 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 APRG1Q8IVJ8 170 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 AGRNO00468 2067 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 TRBV20-1A0A075B6N2 111 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
CLN8-209ENST00000635970 FBN3Q75N90 2809 aa11.46□□□□□ -0.57
CLN8-209ENST00000635970 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.58
CLN8-209ENST00000635970 TMEM141Q96I45 108 aa11.46□□□□□ -0.58
CLN8-209ENST00000635970 EDN2P20800 178 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 UBE2D3P61077 147 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 UBE2D2P62837 147 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 FAM19A4Q96LR4 140 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 NXPH4O95158 308 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 PRR9Q5T870 116 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 UNQ9165/PRO28630Q6UXU0 137 aa11.45□□□□□ -0.58
CLN8-209ENST00000635970 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
CLN8-209ENST00000635970 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
CLN8-209ENST00000635970 NDUFA4O00483 81 aa11.44□□□□□ -0.58
CLN8-209ENST00000635970 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
CLN8-209ENST00000635970 MEGF8Q7Z7M0 2845 aa11.44□□□□□ -0.58
CLN8-209ENST00000635970 GPHB5Q86YW7 130 aa11.43□□□□□ -0.58
CLN8-209ENST00000635970 SOCS3O14543 225 aa11.43□□□□□ -0.58
CLN8-209ENST00000635970 CD7P09564 240 aa11.43□□□□□ -0.58
CLN8-209ENST00000635970 RPL39LQ96EH5 51 aaKnown RBP11.43□□□□□ -0.58
CLN8-209ENST00000635970 IGHV3-49A0A0A0MS15 119 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 TSPAN13O95857 204 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 PMVKQ15126 192 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 ANXA2RQ3ZCQ2 193 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 C9orf66Q5T8R8 295 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 C20orf173Q96LM9 149 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 TIMM17AQ99595 171 aa11.42□□□□□ -0.58
CLN8-209ENST00000635970 MGPP08493 103 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 BEAN1Q3B7T3 259 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 Q6ZQT7 251 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 PPDPFLQ8WWR9 84 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 A0A0J9YY99 117 aa11.41□□□□□ -0.58
CLN8-209ENST00000635970 IGIPA6NJ69 53 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms