RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 RAB4BP61018 213 aa8.15□□□□□ -1.1
LINC00339-206ENST00000634451 Q6ZRU5 148 aa8.15□□□□□ -1.1
LINC00339-206ENST00000634451 HIST1H2BAQ96A08 127 aa8.15□□□□□ -1.1
LINC00339-206ENST00000634451 PHOX2AO14813 284 aa8.14□□□□□ -1.11
LINC00339-206ENST00000634451 UBE2G1P62253 170 aa8.14□□□□□ -1.11
LINC00339-206ENST00000634451 INO80EQ8NBZ0 244 aaPredicted RBP8.14□□□□□ -1.11
LINC00339-206ENST00000634451 FMC1Q96HJ9 113 aa8.14□□□□□ -1.11
LINC00339-206ENST00000634451 ZFP30Q9Y2G7 519 aa8.14□□□□□ -1.11
LINC00339-206ENST00000634451 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 TRBV6-1A0A0K0K1D8 114 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 hDV102S1A0JD36 115 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 MAP1LC3B2A6NCE7 125 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 F5H697 171 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 FHITP49789 147 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 C20orf203Q8NBC4 194 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 SPACA4Q8TDM5 124 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 DERL1Q9BUN8 251 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 MAP1LC3BQ9GZQ8 125 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 KIF25-AS1Q9Y6Z4 181 aa8.13□□□□□ -1.11
LINC00339-206ENST00000634451 A0A0D9SG52 128 aa8.12□□□□□ -1.11
LINC00339-206ENST00000634451 AKR1C3P42330 323 aa8.12□□□□□ -1.11
LINC00339-206ENST00000634451 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
LINC00339-206ENST00000634451 REG3AQ06141 175 aa8.12□□□□□ -1.11
LINC00339-206ENST00000634451 CST9LP1Q5W188 147 aa8.12□□□□□ -1.11
LINC00339-206ENST00000634451 VAX2Q9UIW0 290 aa8.12□□□□□ -1.11
LINC00339-206ENST00000634451 FXYD6-FXYD2A0A087WZ82 144 aa8.11□□□□□ -1.11
LINC00339-206ENST00000634451 A0A1B0GV50 99 aa8.11□□□□□ -1.11
LINC00339-206ENST00000634451 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
LINC00339-206ENST00000634451 SNAI2O43623 268 aa8.11□□□□□ -1.11
LINC00339-206ENST00000634451 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
LINC00339-206ENST00000634451 G3V3Q6 166 aa8.1□□□□□ -1.11
LINC00339-206ENST00000634451 PAGE4O60829 102 aa8.1□□□□□ -1.11
LINC00339-206ENST00000634451 GZMBP10144 247 aa8.1□□□□□ -1.11
LINC00339-206ENST00000634451 DEFA1P59665 94 aa8.1□□□□□ -1.11
LINC00339-206ENST00000634451 AKR1C8PQ5T2L2 129 aa8.1□□□□□ -1.11
LINC00339-206ENST00000634451 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
LINC00339-206ENST00000634451 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
LINC00339-206ENST00000634451 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
LINC00339-206ENST00000634451 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
LINC00339-206ENST00000634451 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
LINC00339-206ENST00000634451 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
LINC00339-206ENST00000634451 MED28Q9H204 178 aa8.09□□□□□ -1.11
LINC00339-206ENST00000634451 CYTL1Q9NRR1 136 aa8.09□□□□□ -1.11
LINC00339-206ENST00000634451 IGHV3-64A0A075B6Q5 118 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 BORCS7-ASMTA0A0B4J1R7 106 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 M0QY20 66 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 MGPP08493 103 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 COX6A2Q02221 97 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 HIGD2BQ4VC39 106 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 CLRN3Q8NCR9 226 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 PRSS3P2Q8NHM4 247 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 STOML3Q8TAV4 291 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 MLST8Q9BVC4 326 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 NKX6-2Q9C056 277 aaPredicted RBP8.08□□□□□ -1.12
LINC00339-206ENST00000634451 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
LINC00339-206ENST00000634451 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
LINC00339-206ENST00000634451 IGKV2-24A0A0C4DH68 120 aa8.07□□□□□ -1.12
LINC00339-206ENST00000634451 A6NHS1 94 aa8.07□□□□□ -1.12
LINC00339-206ENST00000634451 OR5AL1P0C617 328 aa8.07□□□□□ -1.12
LINC00339-206ENST00000634451 NKX2-5P52952 324 aaPredicted RBP8.07□□□□□ -1.12
LINC00339-206ENST00000634451 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
LINC00339-206ENST00000634451 LYPD6BQ8NI32 183 aa8.07□□□□□ -1.12
LINC00339-206ENST00000634451 LPAP08519 4548 aa8.06□□□□□ -1.12
LINC00339-206ENST00000634451 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
LINC00339-206ENST00000634451 GIPP09681 153 aaPredicted RBP8.06□□□□□ -1.12
LINC00339-206ENST00000634451 PKIAP61925 76 aa8.06□□□□□ -1.12
LINC00339-206ENST00000634451 BAGE2Q86Y30 109 aa8.06□□□□□ -1.12
LINC00339-206ENST00000634451 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
LINC00339-206ENST00000634451 LINC01600Q96MT4 127 aa8.06□□□□□ -1.12
LINC00339-206ENST00000634451 GAGE12HA6NDE8 117 aa8.05□□□□□ -1.12
LINC00339-206ENST00000634451 SMLR1H3BR10 107 aa8.05□□□□□ -1.12
LINC00339-206ENST00000634451 CXCL1P09341 107 aa8.05□□□□□ -1.12
LINC00339-206ENST00000634451 MAJINQ3KP22 176 aa8.05□□□□□ -1.12
LINC00339-206ENST00000634451 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
LINC00339-206ENST00000634451 TPPP3Q9BW30 176 aa8.05□□□□□ -1.12
LINC00339-206ENST00000634451 TMEM97Q5BJF2 176 aa8.04□□□□□ -1.12
LINC00339-206ENST00000634451 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.04□□□□□ -1.12
LINC00339-206ENST00000634451 TMEM243Q9BU79 118 aa8.04□□□□□ -1.12
LINC00339-206ENST00000634451 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
LINC00339-206ENST00000634451 A0A096LNI7 61 aa8.03□□□□□ -1.12
LINC00339-206ENST00000634451 ARPC5O15511 151 aa8.03□□□□□ -1.12
LINC00339-206ENST00000634451 SMIM17P0DL12 118 aa8.03□□□□□ -1.12
LINC00339-206ENST00000634451 LINC00526Q96FQ7 95 aa8.03□□□□□ -1.12
LINC00339-206ENST00000634451 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
LINC00339-206ENST00000634451 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
LINC00339-206ENST00000634451 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 P01737 135 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 IGLC6P0CF74 106 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 STPG4Q8N801 248 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 SFT2D1Q8WV19 159 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 TCEAL7Q9BRU2 100 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
LINC00339-206ENST00000634451 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms