RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 SNAI2O43623 268 aa10.36□□□□□ -0.75
PNKP-222ENST00000629088 OR5AL1P0C617 328 aa10.36□□□□□ -0.75
PNKP-222ENST00000629088 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
PNKP-222ENST00000629088 DEFB104AQ8WTQ1 72 aa10.36□□□□□ -0.75
PNKP-222ENST00000629088 ZNF56Q15929 161 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 NEXN-AS1Q8NBZ9 246 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 SFT2D1Q8WV19 159 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 DNAJC30Q96LL9 226 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
PNKP-222ENST00000629088 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
PNKP-222ENST00000629088 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
PNKP-222ENST00000629088 TMEM262E9PQX1 116 aa10.33□□□□□ -0.76
PNKP-222ENST00000629088 CRPP02741 224 aa10.33□□□□□ -0.76
PNKP-222ENST00000629088 RAB14P61106 215 aa10.33□□□□□ -0.76
PNKP-222ENST00000629088 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
PNKP-222ENST00000629088 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
PNKP-222ENST00000629088 VAX2Q9UIW0 290 aa10.33□□□□□ -0.76
PNKP-222ENST00000629088 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
PNKP-222ENST00000629088 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
PNKP-222ENST00000629088 EIF5AL1Q6IS14 154 aaKnown RBP10.32□□□□□ -0.76
PNKP-222ENST00000629088 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
PNKP-222ENST00000629088 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
PNKP-222ENST00000629088 MIAQ16674 131 aa10.31□□□□□ -0.76
PNKP-222ENST00000629088 MPV17L2Q567V2 206 aa10.31□□□□□ -0.76
PNKP-222ENST00000629088 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
PNKP-222ENST00000629088 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
PNKP-222ENST00000629088 C15orf54Q8N8G6 183 aa10.3□□□□□ -0.76
PNKP-222ENST00000629088 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
PNKP-222ENST00000629088 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
PNKP-222ENST00000629088 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
PNKP-222ENST00000629088 F5H697 171 aa10.29□□□□□ -0.76
PNKP-222ENST00000629088 IGLV2-8P01709 118 aa10.29□□□□□ -0.76
PNKP-222ENST00000629088 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
PNKP-222ENST00000629088 SMIM17P0DL12 118 aa10.29□□□□□ -0.76
PNKP-222ENST00000629088 CIRBP-AS1Q8TBR5 109 aa10.29□□□□□ -0.76
PNKP-222ENST00000629088 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
PNKP-222ENST00000629088 LINC00862A6NCI5 91 aa10.28□□□□□ -0.76
PNKP-222ENST00000629088 RPL35P42766 123 aaKnown RBP10.28□□□□□ -0.76
PNKP-222ENST00000629088 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
PNKP-222ENST00000629088 C11orf52Q96A22 123 aa10.28□□□□□ -0.76
PNKP-222ENST00000629088 MANBALQ9NQG1 85 aa10.28□□□□□ -0.76
PNKP-222ENST00000629088 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
PNKP-222ENST00000629088 A0A1B0GV50 99 aa10.27□□□□□ -0.77
PNKP-222ENST00000629088 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.77
PNKP-222ENST00000629088 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.77
PNKP-222ENST00000629088 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
PNKP-222ENST00000629088 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
PNKP-222ENST00000629088 USP17L23D6RBM5 183 aa10.26□□□□□ -0.77
PNKP-222ENST00000629088 H7C1H1 209 aa10.26□□□□□ -0.77
PNKP-222ENST00000629088 RPS20P60866 119 aaKnown RBP10.26□□□□□ -0.77
PNKP-222ENST00000629088 IQCJQ1A5X6 159 aa10.26□□□□□ -0.77
PNKP-222ENST00000629088 ALKAL2Q6UX46 152 aa10.26□□□□□ -0.77
PNKP-222ENST00000629088 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
PNKP-222ENST00000629088 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
PNKP-222ENST00000629088 MUC21A0A0G2JKD1 596 aa10.25□□□□□ -0.77
PNKP-222ENST00000629088 MUC21A0A140T8X8 626 aa10.25□□□□□ -0.77
PNKP-222ENST00000629088 IGLC6P0CF74 106 aa10.25□□□□□ -0.77
PNKP-222ENST00000629088 RAB5CP51148 216 aa10.25□□□□□ -0.77
PNKP-222ENST00000629088 RBX1P62877 108 aa10.25□□□□□ -0.77
PNKP-222ENST00000629088 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 TEX46H3BTG2 121 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 M0QY20 66 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 OXTP01178 125 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 HLA-DQA1P01909 254 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 SULT1A2P50226 295 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 CACNG7P62955 275 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 MED9Q9NWA0 146 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 GNG13Q9P2W3 67 aa10.24□□□□□ -0.77
PNKP-222ENST00000629088 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 F2Z2F3 143 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 PRSS1P07477 247 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 CENPWQ5EE01 88 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 C9orf163Q8N9P6 203 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
PNKP-222ENST00000629088 DAZAP1Q96EP5 407 aaKnown RBP10.23□□□□□ -0.77
PNKP-222ENST00000629088 SSTP61278 116 aa10.22□□□□□ -0.77
PNKP-222ENST00000629088 CCL20P78556 96 aa10.22□□□□□ -0.77
PNKP-222ENST00000629088 GAGE6Q13070 117 aa10.22□□□□□ -0.77
PNKP-222ENST00000629088 LINC00269Q8N2A0 174 aa10.22□□□□□ -0.77
PNKP-222ENST00000629088 OR2D3Q8NGH3 330 aa10.22□□□□□ -0.77
PNKP-222ENST00000629088 PLA2G2DQ9UNK4 145 aa10.22□□□□□ -0.77
PNKP-222ENST00000629088 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.77
PNKP-222ENST00000629088 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
PNKP-222ENST00000629088 PDE6DO43924 150 aa10.21□□□□□ -0.77
PNKP-222ENST00000629088 P01737 135 aa10.21□□□□□ -0.77
PNKP-222ENST00000629088 TPPP3Q9BW30 176 aa10.21□□□□□ -0.77
PNKP-222ENST00000629088 BIN3Q9NQY0 253 aa10.21□□□□□ -0.77
PNKP-222ENST00000629088 MGPP08493 103 aa10.2□□□□□ -0.78
PNKP-222ENST00000629088 TRGC1P0CF51 173 aa10.2□□□□□ -0.78
PNKP-222ENST00000629088 GNG4P50150 75 aa10.2□□□□□ -0.78
PNKP-222ENST00000629088 REG3AQ06141 175 aa10.2□□□□□ -0.78
PNKP-222ENST00000629088 SUMO4Q6EEV6 95 aa10.2□□□□□ -0.78
PNKP-222ENST00000629088 PGLYRP4Q96LB8 373 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms