RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
CHD2-211ENST00000627460 Q6ZWC4 215 aa6.25□□□□□ -1.41
CHD2-211ENST00000627460 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
CHD2-211ENST00000627460 OR4C5Q8NGB2 326 aa6.25□□□□□ -1.41
CHD2-211ENST00000627460 SETD2Q9BYW2 2564 aaPredicted RBP6.25□□□□□ -1.41
CHD2-211ENST00000627460 SORL1Q92673 2214 aa6.25□□□□□ -1.41
CHD2-211ENST00000627460 TRAV26-2A0A0B4J265 109 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 LYRM9A8MSI8 78 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 M0QY20 66 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 IGHV3-53P01767 116 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 MIFP14174 115 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 SMAGPQ0VAQ4 97 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 RHOHQ15669 191 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 CFAP126Q5VTH2 177 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 SPATA12Q7Z6I5 190 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 URB1-AS1Q96HZ7 61 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 C18orf15Q96N68 181 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 TP53TG1Q9Y2A0 90 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 TNFRSF18Q9Y5U5 241 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 CUBNO60494 3623 aa6.24□□□□□ -1.41
CHD2-211ENST00000627460 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
CHD2-211ENST00000627460 TRGV2A0A075B6R0 118 aa6.23□□□□□ -1.41
CHD2-211ENST00000627460 SDHAF1A6NFY7 115 aa6.23□□□□□ -1.41
CHD2-211ENST00000627460 SPRY2O43597 315 aa6.23□□□□□ -1.41
CHD2-211ENST00000627460 NUDT3O95989 172 aa6.23□□□□□ -1.41
CHD2-211ENST00000627460 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
CHD2-211ENST00000627460 POLR2KP53803 58 aaKnown RBP6.23□□□□□ -1.41
CHD2-211ENST00000627460 NOP10Q9NPE3 64 aaKnown RBP6.23□□□□□ -1.41
CHD2-211ENST00000627460 MRPL16Q9NX20 251 aaKnown RBP6.23□□□□□ -1.41
CHD2-211ENST00000627460 TEP1Q99973 2627 aaKnown RBP6.23□□□□□ -1.41
CHD2-211ENST00000627460 HSBP1L1C9JCN9 74 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 TSTD3H0UI37 97 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 SYS1-DBNDD2H3BUS1 97 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 I3L3M4 83 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
CHD2-211ENST00000627460 PAPPA-AS1Q5QFB9 102 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 UFSP1Q6NVU6 142 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
CHD2-211ENST00000627460 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 JPT2Q9H910 190 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 CYSLTR1Q9Y271 337 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 MUC4Q99102 2169 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 JMJD1CQ15652 2540 aa6.22□□□□□ -1.41
CHD2-211ENST00000627460 NIPBLQ6KC79 2804 aaeCLIP6.21□□□□□ -1.42
CHD2-211ENST00000627460 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.21□□□□□ -1.42
CHD2-211ENST00000627460 K7EQD1 137 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 NPSP0C0P6 89 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
CHD2-211ENST00000627460 TMEM97Q5BJF2 176 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 RNF183Q96D59 192 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
CHD2-211ENST00000627460 PRADC1Q9BSG0 188 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
CHD2-211ENST00000627460 LGALS9CQ6DKI2 356 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 Q6ZN92 141 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 TEX43Q6ZNM6 134 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 ERASQ7Z444 233 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 DAZ4Q86SG3 579 aaKnown RBP6.2□□□□□ -1.42
CHD2-211ENST00000627460 OR11H2Q8NH07 326 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 TMEM141Q96I45 108 aa6.2□□□□□ -1.42
CHD2-211ENST00000627460 DAZ3Q9NR90 486 aaKnown RBP6.2□□□□□ -1.42
CHD2-211ENST00000627460 ATRQ13535 2644 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 TRBV7-3A0A075B6L6 115 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 TRGV4A0A0C4DH28 118 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 GAGE12BA1L429 117 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 PLAC8L1A1L4L8 177 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 GAGE7O76087 117 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 GAS8-AS1O95177 125 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 GAGE12FP0CL80 117 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 GAGE12GP0CL81 117 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 GAGE12IP0CL82 117 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 RIPPLY3P57055 190 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 PKIAP61925 76 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 COTL1Q14019 142 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 DEFB135Q30KP9 77 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 LINC01545Q5VT33 79 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 C2orf66Q6UXQ4 117 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 Q6ZTI0 123 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 LINC00612Q8N6U2 182 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 SPATA3Q8NHX4 192 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 SCGB3A1Q96QR1 104 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 TIMM17AQ99595 171 aa6.19□□□□□ -1.42
CHD2-211ENST00000627460 A0A096LNJ9 63 aa6.18□□□□□ -1.42
CHD2-211ENST00000627460 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
CHD2-211ENST00000627460 PRSS1P07477 247 aa6.18□□□□□ -1.42
CHD2-211ENST00000627460 SPART-AS1P0CW21 52 aa6.18□□□□□ -1.42
CHD2-211ENST00000627460 CRYBA4P53673 196 aa6.18□□□□□ -1.42
CHD2-211ENST00000627460 NEXN-AS1Q8NBZ9 246 aa6.18□□□□□ -1.42
CHD2-211ENST00000627460 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
CHD2-211ENST00000627460 TRAV9-2A0A087WT02 112 aa6.17□□□□□ -1.42
CHD2-211ENST00000627460 IGHV3-73A0A0B4J1V6 119 aa6.17□□□□□ -1.42
CHD2-211ENST00000627460 PRM2P04554 102 aa6.17□□□□□ -1.42
CHD2-211ENST00000627460 PLNP26678 52 aa6.17□□□□□ -1.42
CHD2-211ENST00000627460 SH2D6Q7Z4S9 175 aa6.17□□□□□ -1.42
CHD2-211ENST00000627460 ZNF479Q96JC4 524 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms