RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 LINC01560Q8TB33 94 aa3.13□□□□□ -1.91
PTP4A1-205ENST00000626021 UBE2WQ96B02 151 aa3.13□□□□□ -1.91
PTP4A1-205ENST00000626021 C16orf92Q96LL3 132 aa3.13□□□□□ -1.91
PTP4A1-205ENST00000626021 TP53TG1Q9Y2A0 90 aa3.13□□□□□ -1.91
PTP4A1-205ENST00000626021 PIEZO1Q92508 2521 aa3.13□□□□□ -1.91
PTP4A1-205ENST00000626021 MUC4Q99102 2169 aa3.13□□□□□ -1.91
PTP4A1-205ENST00000626021 DCHS2Q6V1P9 2916 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 NBEAQ8NFP9 2946 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 CRLF1O75462 422 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 ACYP1P07311 99 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 HERV-K104P63124 156 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 C15orf32Q32M92 178 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 NSUN5P1Q3KNT7 163 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 TMEM170BQ5T4T1 132 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 SFTA2Q6UW10 78 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 VMO1Q7Z5L0 202 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 TRPT1Q86TN4 253 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 CCDC140Q96MF4 163 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 SPANXCQ9NY87 97 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 TNFRSF18Q9Y5U5 241 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 TPRP12270 2363 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 TRAV2A0A0B4J234 112 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 SOCS3O14543 225 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 MGPP08493 103 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 COX6CP09669 75 aa3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 RNASE4P34096 147 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 PRB3Q04118 309 aaPredicted RBP3.12□□□□□ -1.91
PTP4A1-205ENST00000626021 BRI3O95415 125 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 ZNF22P17026 224 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 ARL3P36405 182 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 SUMO4Q6EEV6 95 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 FAM159AQ6UWV7 190 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 C2orf82Q6UX34 121 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 CLEC19AQ6UXS0 136 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 Q6ZQT7 251 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 SMIM20Q8N5G0 67 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 C20orf173Q96LM9 149 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 NBASA2RRP1 2371 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 WNK2Q9Y3S1 2297 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 LAMA5O15230 3695 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 CR1P17927 2039 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 A0A0J9YXY3 114 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 FAM223BA6NKX1 122 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 KLLNB2CW77 178 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 LYNX1G3V0Z9 82 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 H7C423 109 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 LST1O00453 97 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 NDUFA4O00483 81 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 GNRH2O43555 120 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 ATP5G1P05496 136 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 LYNX1P0DP58 116 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 MEIG1Q5JSS6 88 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 FAM223AQ8IWN6 122 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 EDA2RQ9HAV5 297 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 PYGO1Q9Y3Y4 419 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 ICOSQ9Y6W8 199 aa3.11□□□□□ -1.91
PTP4A1-205ENST00000626021 ZZEF1O43149 2961 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 LRBAP50851 2863 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 ADGRG4Q8IZF6 3080 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 IGHV3OR16-8A0A075B7F1 116 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 IGHV3-35A0A0C4DH35 117 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 IGHV3-66A0A0C4DH42 116 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 TEX49A0A1B0GTD5 131 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 A0A1W2PPR1 153 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 ATP6V0E1O15342 81 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 TRIAP1O43715 76 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 TIMM17BO60830 172 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 RPL39P62891 51 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 Q1RN00 199 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 C20orf203Q8NBC4 194 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 LINC01587Q99440 93 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 LITAFQ99732 161 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 YAE1D1Q9NRH1 226 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 IGSF10Q6WRI0 2623 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 DOPEY1Q5JWR5 2465 aa3.1□□□□□ -1.91
PTP4A1-205ENST00000626021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.1□□□□□ -1.916e-8■■■■■ 52.8
PTP4A1-205ENST00000626021 TGFAP01135 160 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 IGHV4-39P01824 125 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 IGF1P05019 195 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 UBE2E1P51965 193 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 ECSCRQ19T08 205 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 C19orf54Q5BKX5 351 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 SDIM1Q6ZPB5 146 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 TMEM101Q96IK0 257 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 C9orf85Q96MD7 179 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 SIRPDQ9H106 197 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 USP24Q9UPU5 2620 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 CFAP46Q8IYW2 2715 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 IGLV4-3A0A075B6K6 122 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 IGHV1-58A0A0C4DH39 117 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 H3BUA1 57 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 I3L3M4 83 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 ELANEP08246 267 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 EMP1P54849 157 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 RNF152Q8N8N0 203 aa3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 ZNF256Q9Y2P7 627 aaPredicted RBP3.09□□□□□ -1.91
PTP4A1-205ENST00000626021 IGHV3OR16-13A0A075B7E8 117 aa3.08□□□□□ -1.92
PTP4A1-205ENST00000626021 IGHV3-74A0A0B4J1X5 117 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms