RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 VAX2Q9UIW0 290 aa7.01□□□□□ -1.29
DDX41-218ENST00000625286 SNAI2O43623 268 aa7□□□□□ -1.29
DDX41-218ENST00000625286 FHITP49789 147 aa7□□□□□ -1.29
DDX41-218ENST00000625286 ZNF56Q15929 161 aa7□□□□□ -1.29
DDX41-218ENST00000625286 MLST8Q9BVC4 326 aa7□□□□□ -1.29
DDX41-218ENST00000625286 NKX6-2Q9C056 277 aaPredicted RBP7□□□□□ -1.29
DDX41-218ENST00000625286 IGLV10-54A0A075B6I4 117 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 A0A087WYN8 130 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 G3V3Q6 166 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 DEFA1P59665 94 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 SSTP61278 116 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 UBE2G1P62253 170 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
DDX41-218ENST00000625286 DERL1Q9BUN8 251 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 CYTL1Q9NRR1 136 aa6.99□□□□□ -1.29
DDX41-218ENST00000625286 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
DDX41-218ENST00000625286 MAP1LC3B2A6NCE7 125 aa6.98□□□□□ -1.29
DDX41-218ENST00000625286 C20orf203Q8NBC4 194 aa6.98□□□□□ -1.29
DDX41-218ENST00000625286 INO80EQ8NBZ0 244 aaPredicted RBP6.98□□□□□ -1.29
DDX41-218ENST00000625286 ZNF471Q9BX82 626 aaPredicted RBP6.98□□□□□ -1.29
DDX41-218ENST00000625286 MAP1LC3BQ9GZQ8 125 aa6.98□□□□□ -1.29
DDX41-218ENST00000625286 MED28Q9H204 178 aa6.98□□□□□ -1.29
DDX41-218ENST00000625286 BORCS7-ASMTA0A0B4J1R7 106 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 A0A0D9SG52 128 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 F5H697 171 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 PAGE4O60829 102 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 RAB5CP51148 216 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 REG3AQ06141 175 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 IQCJQ1A5X6 159 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 AKR1C8PQ5T2L2 129 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 CST9LP1Q5W188 147 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 CLRN3Q8NCR9 226 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 SPACA4Q8TDM5 124 aa6.97□□□□□ -1.29
DDX41-218ENST00000625286 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 hDV102S1A0JD36 115 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 M0QY20 66 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 CXCL1P09341 107 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 GIPP09681 153 aaPredicted RBP6.96□□□□□ -1.3
DDX41-218ENST00000625286 OR5AL1P0C617 328 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 AKR1C3P42330 323 aa6.96□□□□□ -1.3
DDX41-218ENST00000625286 TRBV25-1A0A075B6N4 114 aa6.95□□□□□ -1.3
DDX41-218ENST00000625286 PHOX2AO14813 284 aa6.95□□□□□ -1.3
DDX41-218ENST00000625286 SPANXN1Q5VSR9 72 aa6.95□□□□□ -1.3
DDX41-218ENST00000625286 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
DDX41-218ENST00000625286 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
DDX41-218ENST00000625286 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 IGHV1-24A0A0C4DH33 117 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 GZMBP10144 247 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 PKIAP61925 76 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 BAGE2Q86Y30 109 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 C15orf56Q8N910 161 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 DPH3Q96FX2 82 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 LINC01600Q96MT4 127 aa6.94□□□□□ -1.3
DDX41-218ENST00000625286 LPAP08519 4548 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 A0A1B0GUV1 79 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 A0A1B0GV50 99 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 PRSS3P2Q8NHM4 247 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 MBD3L1Q8WWY6 194 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 RNF185Q96GF1 192 aa6.93□□□□□ -1.3
DDX41-218ENST00000625286 TRAV8-4A0A0B4J246 113 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 P01737 135 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 IGLC6P0CF74 106 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 NKX2-5P52952 324 aaPredicted RBP6.92□□□□□ -1.3
DDX41-218ENST00000625286 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 COX6A2Q02221 97 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 TMUB2Q71RG4 321 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 SFT2D1Q8WV19 159 aa6.92□□□□□ -1.3
DDX41-218ENST00000625286 SMLR1H3BR10 107 aa6.91□□□□□ -1.3
DDX41-218ENST00000625286 S100A9P06702 114 aaKnown RBP6.91□□□□□ -1.3
DDX41-218ENST00000625286 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.91□□□□□ -1.3
DDX41-218ENST00000625286 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 ARPC5O15511 151 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 MGPP08493 103 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 RPL35P42766 123 aaKnown RBP6.9□□□□□ -1.3
DDX41-218ENST00000625286 CCL20P78556 96 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
DDX41-218ENST00000625286 AP1S3Q96PC3 154 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
DDX41-218ENST00000625286 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
DDX41-218ENST00000625286 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
DDX41-218ENST00000625286 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
DDX41-218ENST00000625286 LYPD6BQ8NI32 183 aa6.89□□□□□ -1.31
DDX41-218ENST00000625286 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
DDX41-218ENST00000625286 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
DDX41-218ENST00000625286 AP5S1Q9NUS5 200 aa6.89□□□□□ -1.31
DDX41-218ENST00000625286 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 A0A0J9YXV3 536 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
DDX41-218ENST00000625286 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 RASL11AQ6T310 242 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 FER1L6-AS1Q8NA97 138 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 PGLYRP4Q96LB8 373 aa6.88□□□□□ -1.31
DDX41-218ENST00000625286 A0A096LNI7 61 aa6.87□□□□□ -1.31
DDX41-218ENST00000625286 RAB19A4D1S5 217 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 391 ms