RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 CRYGDP07320 174 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 MGPP08493 103 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 RASL10AQ92737 203 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 ALKBH7Q9BT30 221 aaPredicted RBP8.85□□□□□ -0.99
PNKP-217ENST00000625216 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 UFSP1Q6NVU6 142 aa8.84□□□□□ -0.99
PNKP-217ENST00000625216 TRAV26-2A0A0B4J265 109 aa8.83□□□□□ -1
PNKP-217ENST00000625216 A8MWV9 139 aa8.83□□□□□ -1
PNKP-217ENST00000625216 RS1O15537 224 aa8.83□□□□□ -1
PNKP-217ENST00000625216 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
PNKP-217ENST00000625216 IQCJQ1A5X6 159 aa8.83□□□□□ -1
PNKP-217ENST00000625216 FAM74A4Q5TZK3 123 aa8.83□□□□□ -1
PNKP-217ENST00000625216 CFAP126Q5VTH2 177 aa8.83□□□□□ -1
PNKP-217ENST00000625216 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
PNKP-217ENST00000625216 GAGE12BA1L429 117 aa8.82□□□□□ -1
PNKP-217ENST00000625216 M0R2N4 97 aa8.82□□□□□ -1
PNKP-217ENST00000625216 GAGE7O76087 117 aa8.82□□□□□ -1
PNKP-217ENST00000625216 NPYP01303 97 aa8.82□□□□□ -1
PNKP-217ENST00000625216 GAGE12FP0CL80 117 aa8.82□□□□□ -1
PNKP-217ENST00000625216 GAGE12GP0CL81 117 aa8.82□□□□□ -1
PNKP-217ENST00000625216 GAGE12IP0CL82 117 aa8.82□□□□□ -1
PNKP-217ENST00000625216 SMIM17P0DL12 118 aa8.82□□□□□ -1
PNKP-217ENST00000625216 CKS2P33552 79 aa8.82□□□□□ -1
PNKP-217ENST00000625216 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
PNKP-217ENST00000625216 Q6ZR54 194 aa8.82□□□□□ -1
PNKP-217ENST00000625216 C18orf32Q8TCD1 76 aa8.82□□□□□ -1
PNKP-217ENST00000625216 MRAP2Q96G30 205 aa8.82□□□□□ -1
PNKP-217ENST00000625216 PRELID3AQ96N28 172 aa8.82□□□□□ -1
PNKP-217ENST00000625216 IGHV3-73A0A0B4J1V6 119 aa8.81□□□□□ -1
PNKP-217ENST00000625216 H3BNG1 76 aa8.81□□□□□ -1
PNKP-217ENST00000625216 NUDT3O95989 172 aa8.81□□□□□ -1
PNKP-217ENST00000625216 CCL18P55774 89 aa8.81□□□□□ -1
PNKP-217ENST00000625216 NDUFA6P56556 154 aa8.81□□□□□ -1
PNKP-217ENST00000625216 LINC00310P59036 64 aa8.81□□□□□ -1
PNKP-217ENST00000625216 ZNF56Q15929 161 aa8.81□□□□□ -1
PNKP-217ENST00000625216 ORMDL3Q8N138 153 aa8.81□□□□□ -1
PNKP-217ENST00000625216 NRACQ8N912 160 aa8.81□□□□□ -1
PNKP-217ENST00000625216 C18orf15Q96N68 181 aa8.81□□□□□ -1
PNKP-217ENST00000625216 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
PNKP-217ENST00000625216 TRAV4A0A0B4J268 109 aa8.8□□□□□ -1
PNKP-217ENST00000625216 RHODO00212 210 aa8.8□□□□□ -1
PNKP-217ENST00000625216 IGHV3-53P01767 116 aa8.8□□□□□ -1
PNKP-217ENST00000625216 PPBPP02775 128 aa8.8□□□□□ -1
PNKP-217ENST00000625216 Q0VG73 95 aa8.8□□□□□ -1
PNKP-217ENST00000625216 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
PNKP-217ENST00000625216 ZNF479Q96JC4 524 aa8.8□□□□□ -1
PNKP-217ENST00000625216 RTL8CO15255 209 aa8.79□□□□□ -1
PNKP-217ENST00000625216 OR10J3Q5JRS4 329 aa8.79□□□□□ -1
PNKP-217ENST00000625216 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
PNKP-217ENST00000625216 Q6ZSN1 163 aa8.79□□□□□ -1
PNKP-217ENST00000625216 OR4C5Q8NGB2 326 aa8.79□□□□□ -1
PNKP-217ENST00000625216 URB1-AS1Q96HZ7 61 aa8.79□□□□□ -1
PNKP-217ENST00000625216 TRGV2A0A075B6R0 118 aa8.78□□□□□ -1
PNKP-217ENST00000625216 TRAV26-1A0A087WT03 109 aa8.78□□□□□ -1
PNKP-217ENST00000625216 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
PNKP-217ENST00000625216 F5H697 171 aa8.78□□□□□ -1
PNKP-217ENST00000625216 TNFRSF6BO95407 300 aa8.78□□□□□ -1
PNKP-217ENST00000625216 LAMTOR2Q9Y2Q5 125 aa8.78□□□□□ -1
PNKP-217ENST00000625216 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
PNKP-217ENST00000625216 HERC2O95714 4834 aa8.78□□□□□ -1
PNKP-217ENST00000625216 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1
PNKP-217ENST00000625216 C5orf52A6NGY3 159 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 M0QY20 66 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 NUPR1O60356 82 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 SERF1AO75920 110 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 S100A6P06703 90 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 HOXA5P20719 270 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 ZFP2Q6ZN57 461 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 ZNRF2Q8NHG8 242 aa8.77□□□□□ -1.01
PNKP-217ENST00000625216 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
PNKP-217ENST00000625216 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
PNKP-217ENST00000625216 BAGE3Q86Y29 109 aa8.76□□□□□ -1.01
PNKP-217ENST00000625216 MAP1LC3AQ9H492 121 aa8.76□□□□□ -1.01
PNKP-217ENST00000625216 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
PNKP-217ENST00000625216 A0A0J9YY99 117 aa8.75□□□□□ -1.01
PNKP-217ENST00000625216 NBDYA0A0U1RRE5 68 aa8.75□□□□□ -1.01
PNKP-217ENST00000625216 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
PNKP-217ENST00000625216 Q9UF83 564 aa8.75□□□□□ -1.01
PNKP-217ENST00000625216 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 PRSS47A8MTI9 375 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 K7EQD1 137 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 IFI27P40305 119 aaPredicted RBP8.74□□□□□ -1.01
PNKP-217ENST00000625216 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
PNKP-217ENST00000625216 FHL2Q14192 279 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 PDZD11Q5EBL8 140 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 RNASEKQ6P5S7 137 aaKnown RBP8.74□□□□□ -1.01
PNKP-217ENST00000625216 NIT1Q86X76 327 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 NEXN-AS1Q8NBZ9 246 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 SMIM2Q9BVW6 85 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 Q9H8V8 135 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
PNKP-217ENST00000625216 PKD1P98161 4303 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 IFITM10A6NMD0 228 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 H7C1H1 209 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 CIDEAO60543 219 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms