RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y CXCL1P09341 107 aa10.49□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y H2AFB1P0C5Y9 115 aa10.49□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y C15orf54Q8N8G6 183 aa10.49□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y DAZAP1Q96EP5 407 aaKnown RBP10.48□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y MLST8Q9BVC4 326 aa10.48□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y TRBV7-3A0A075B6L6 115 aa10.47□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y ANGP03950 147 aaKnown RBP10.47□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y UBE2D3P61077 147 aa10.47□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y UBE2D2P62837 147 aa10.47□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y RAB4BP61018 213 aa10.46□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y TMUB2Q71RG4 321 aa10.46□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y OR10G8Q8NGN5 311 aa10.46□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y TMA7Q9Y2S6 64 aaKnown RBP10.46□□□□□ -0.73
CD99-211ENST00000623253_PAR_Y TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y SNAI2O43623 268 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y OR5AL1P0C617 328 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y ZNF56Q15929 161 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y PRR27Q6MZM9 219 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y MANBALQ9NQG1 85 aa10.45□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y PRSS1P07477 247 aa10.44□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y RPL35P42766 123 aaKnown RBP10.44□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y SPANXN1Q5VSR9 72 aa10.44□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y SSBP4Q9BWG4 385 aaPredicted RBP10.44□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y TRAV1-1A0A0B4J248 108 aa10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y RAB5CP51148 216 aa10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y EIF5AL1Q6IS14 154 aaKnown RBP10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y SREK1IP1Q8N9Q2 155 aaPredicted RBP10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y C11orf52Q96A22 123 aa10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y GNG13Q9P2W3 67 aa10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.43□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y TEX46H3BTG2 121 aa10.42□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y DGAT2L7PQ6IED9 249 aa10.42□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y CCL20P78556 96 aa10.41□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y MIAQ16674 131 aa10.41□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y F5H697 171 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y PANO1I0J062 215 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y SMIM17P0DL12 118 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y PKIAP61925 76 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y CENPWQ5EE01 88 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y DPH3Q96FX2 82 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y DERL1Q9BUN8 251 aa10.4□□□□□ -0.74
CD99-211ENST00000623253_PAR_Y GHRHP01286 108 aa10.39□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y SSTP61278 116 aa10.39□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y MT1HL1P0DM35 61 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y SULT1A2P50226 295 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y GAGE6Q13070 117 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y TMEM97Q5BJF2 176 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y IFNA1P01562 189 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y GNG4P50150 75 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y RBX1P62877 108 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y FER1L6-AS1Q8NA97 138 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y VAX2Q9UIW0 290 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y PDE6DO43924 150 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y GZMBP10144 247 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y Q6ZRU5 148 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y NTM-AS1Q6ZSK4 140 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y TCTE3Q8IZS6 198 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y OR2D3Q8NGH3 330 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y IGLV10-54A0A075B6I4 117 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y RAB19A4D1S5 217 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y C19orf71A6NCJ1 209 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y IGLC6P0CF74 106 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y CACNG7P62955 275 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y CLRN3Q8NCR9 226 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y PRR34Q9NV39 138 aa10.35□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y hDV102S1A0JD36 115 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y H7C1H1 209 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y P01737 135 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y MGPP08493 103 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y BCL2P10415 239 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y SLC51BQ86UW2 128 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y MED9Q9NWA0 146 aa10.34□□□□□ -0.75
CD99-211ENST00000623253_PAR_Y TRBV25-1A0A075B6N4 114 aa10.33□□□□□ -0.76
CD99-211ENST00000623253_PAR_Y F2Z2F3 143 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms