RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ATG2AQ2TAZ0 1938 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 A0A0J9YX75 114 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 IFITM1P13164 125 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 APOC4P55056 127 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 CRLF1O75462 422 aa12.25□□□□□ -0.45
GABRB3-215ENST00000622697 MYCNOSP40205 109 aa12.25□□□□□ -0.45
GABRB3-215ENST00000622697 NCOR2Q9Y618 2525 aa12.25□□□□□ -0.45
GABRB3-215ENST00000622697 NAV3Q8IVL0 2385 aa12.25□□□□□ -0.45
GABRB3-215ENST00000622697 BAALC-AS2P0C853 105 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 IGLV2-11P01706 119 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 GYPEP15421 78 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 HAMPP81172 84 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 ANKRD29Q8N6D5 301 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 SONP18583 2426 aaKnown RBP12.24□□□□□ -0.45
GABRB3-215ENST00000622697 PTH2Q96A98 100 aa12.24□□□□□ -0.45
GABRB3-215ENST00000622697 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
GABRB3-215ENST00000622697 ICOSQ9Y6W8 199 aa12.23□□□□□ -0.45
GABRB3-215ENST00000622697 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 DEFB4AO15263 64 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 CRYBA4P53673 196 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 C10orf99Q6UWK7 81 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 ZFAND3Q9H8U3 227 aa12.22□□□□□ -0.45
GABRB3-215ENST00000622697 TRAV4A0A0B4J268 109 aa12.21□□□□□ -0.45
GABRB3-215ENST00000622697 DSCAMO60469 2012 aa12.21□□□□□ -0.45
GABRB3-215ENST00000622697 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.45
GABRB3-215ENST00000622697 TNRC6BQ9UPQ9 1833 aaKnown RBP12.21□□□□□ -0.45
GABRB3-215ENST00000622697 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.46
GABRB3-215ENST00000622697 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.46
GABRB3-215ENST00000622697 TLN1Q9Y490 2541 aaKnown RBP12.21□□□□□ -0.46
GABRB3-215ENST00000622697 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.46
GABRB3-215ENST00000622697 CLEC2BQ92478 149 aa12.2□□□□□ -0.46
GABRB3-215ENST00000622697 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
GABRB3-215ENST00000622697 SND1-IT1Q9HBX3 110 aa12.2□□□□□ -0.46
GABRB3-215ENST00000622697 NKAPP1Q8N9T2 125 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 CITED2Q99967 270 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-215ENST00000622697 SORL1Q92673 2214 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
GABRB3-215ENST00000622697 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
GABRB3-215ENST00000622697 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
GABRB3-215ENST00000622697 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
GABRB3-215ENST00000622697 F8WEM9 126 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 CDSNQ15517 529 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 RNF152Q8N8N0 203 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 UBL5Q9BZL1 73 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 GAS8-AS1O95177 125 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 TEN1Q86WV5 123 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 PIFOQ8TCI5 191 aa12.18□□□□□ -0.46
GABRB3-215ENST00000622697 HERV-K104P63124 156 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 MAPKAPK5-AS1Q8N8E1 139 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 Q6ZUT4 128 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 HIVEP2P31629 2446 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 EML5Q05BV3 1969 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 HIVEP3Q5T1R4 2406 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
GABRB3-215ENST00000622697 FOXI1Q12951 378 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 HIST2H2BCQ6DN03 193 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 TNFRSF13BO14836 293 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-215ENST00000622697 LINC00310P59036 64 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 C11orf71Q6IPW1 123 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 COX7B2Q8TF08 81 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 MAP6D1Q9H9H5 199 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 Q9HAA7 133 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 IGHG4P01861 327 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 EBI3Q14213 229 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 C4orf3Q8WVX3 66 aa12.16□□□□□ -0.46
GABRB3-215ENST00000622697 G3V4G9 280 aa12.15□□□□□ -0.46
GABRB3-215ENST00000622697 MRAPQ8TCY5 172 aa12.15□□□□□ -0.46
GABRB3-215ENST00000622697 IGKV2D-24A0A075B6R9 120 aa12.15□□□□□ -0.46
GABRB3-215ENST00000622697 NDUFA11Q86Y39 141 aa12.15□□□□□ -0.46
GABRB3-215ENST00000622697 B5MCH6 92 aa12.15□□□□□ -0.46
GABRB3-215ENST00000622697 ZFAND2AQ8N6M9 145 aa12.15□□□□□ -0.46
GABRB3-215ENST00000622697 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 DSCR8Q96T75 97 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 C11orf21Q9P2W6 132 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 HHLA3Q9XRX5 114 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
GABRB3-215ENST00000622697 PRR9Q5T870 116 aa12.13□□□□□ -0.47
GABRB3-215ENST00000622697 TCL1BO95988 128 aa12.13□□□□□ -0.47
GABRB3-215ENST00000622697 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
GABRB3-215ENST00000622697 PROK1P58294 105 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 Q6ZS46 218 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 DEFB105AQ8NG35 78 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 ORMDL1Q9P0S3 153 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 Q6ZTI0 123 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 U3KQK5 164 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 LGALS9O00182 355 aa12.12□□□□□ -0.47
GABRB3-215ENST00000622697 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms