RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CST7O76096 145 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 SIX6O95475 246 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 CCL4P13236 92 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 ATP5EP56381 51 aaPredicted RBP1.78□□□□□ -2.12
CPNE3-213ENST00000622183 ADIRFQ15847 76 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 PMCHL1Q16048 86 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 ASB16-AS1Q495Z4 193 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 LINC01554Q52M75 96 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 FP248Q71RG6 208 aaPredicted RBP1.78□□□□□ -2.12
CPNE3-213ENST00000622183 COMMD6Q7Z4G1 85 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 WFDC11Q8NEX6 87 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 STAG3L4Q8TBR4 150 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 C18orf32Q8TCD1 76 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 PPDPFLQ8WWR9 84 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 LSM10Q969L4 123 aaKnown RBP1.78□□□□□ -2.12
CPNE3-213ENST00000622183 AMELYQ99218 206 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 C20orf78Q9BR46 151 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 FN1P02751 2386 aaKnown RBP1.78□□□□□ -2.12
CPNE3-213ENST00000622183 SORL1Q92673 2214 aa1.78□□□□□ -2.13
CPNE3-213ENST00000622183 LY75O60449 1722 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 PARP4Q9UKK3 1724 aaKnown RBP1.77□□□□□ -2.13
CPNE3-213ENST00000622183 GCC2Q8IWJ2 1684 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 ABCC8Q09428 1581 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 TRBV6-5A0A0K0K1A5 114 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 SYS1-DBNDD2H3BUS1 97 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 TRACP01848 142 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 CRPP02741 224 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 TCRAP04437 139 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 IL5P05113 134 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 SLC25A4P12235 298 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 RNASE4P34096 147 aaKnown RBP1.77□□□□□ -2.13
CPNE3-213ENST00000622183 CDK5R1Q15078 307 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 NNATQ16517 81 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 KRTAP21-3Q3LHN1 58 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 LINC00471Q8N535 108 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 OR10AG1Q8NH19 301 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 WFDC5Q8TCV5 224 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 DIRC1Q969H9 104 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 S100A16Q96FQ6 103 aaKnown RBP1.77□□□□□ -2.13
CPNE3-213ENST00000622183 PMCHL2Q9BQD1 86 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 SPCS1Q9Y6A9 102 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 POLEQ07864 2286 aa1.77□□□□□ -2.13
CPNE3-213ENST00000622183 MED1Q15648 1581 aaPredicted RBP1.76□□□□□ -2.13
CPNE3-213ENST00000622183 MRC1P22897 1456 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 IGKV1-9A0A0C4DH69 117 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 RBAKDNA6NC62 111 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 C17orf112F2Z3M2 114 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 LYRM1O43325 122 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 SNCGO76070 127 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 PRB1P04280 392 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 SFTA3P0C7M3 94 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 COX6A1P12074 109 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 FABP2P12104 132 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 CBLN1P23435 193 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 NPC2P61916 151 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 HBBP68871 147 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 SPATA45Q537H7 98 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 C12orf73Q69YU5 71 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 OR2T35Q8NGX2 323 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 ZC2HC1AQ96GY0 325 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 PRELID3AQ96N28 172 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 DPH3P1Q9H4G8 78 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 LSM2Q9Y333 95 aaKnown RBP1.76□□□□□ -2.13
CPNE3-213ENST00000622183 TNS1Q9HBL0 1735 aaKnown RBP1.76□□□□□ -2.13
CPNE3-213ENST00000622183 NHSQ6T4R5 1651 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 FAM208AQ9UK61 1670 aaKnown RBP1.76□□□□□ -2.13
CPNE3-213ENST00000622183 TOP2BQ02880 1626 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 PHRF1Q9P1Y6 1649 aaKnown RBP1.76□□□□□ -2.13
CPNE3-213ENST00000622183 NRXN3Q9Y4C0 1643 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 ADGRB2O60241 1585 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 TULP4Q9NRJ4 1543 aa1.76□□□□□ -2.13
CPNE3-213ENST00000622183 COL11A1P12107 1806 aaPredicted RBP1.75□□□□□ -2.13
CPNE3-213ENST00000622183 COL4A6Q14031 1691 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 FAM24AA6NFZ4 105 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 SNRPGP15A8MWD9 76 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 TMEM256-PLSCR3K7ERE1 68 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 ATOX1O00244 68 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 TCL1BO95988 128 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 CD3DP04234 171 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 CXCL1P09341 107 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 DYNLT3P51808 116 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 UBE2BP63146 152 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 Q6ZQT0 140 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 OR5AS1Q8N127 324 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 SIGLECL1Q8N7X8 197 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 CCL4L1Q8NHW4 92 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 LY96Q9Y6Y9 160 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 KDM6BO15054 1643 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 PAPPAQ13219 1627 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 GBF1Q92538 1859 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 CPS1P31327 1500 aa1.75□□□□□ -2.13
CPNE3-213ENST00000622183 TANC2Q9HCD6 1990 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 PLXNA2O75051 1894 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 UBE2L5PA0A1B0GUS4 154 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 A6NN06 94 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 NUPR1O60356 82 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 IGKCP01834 107 aa1.74□□□□□ -2.13
CPNE3-213ENST00000622183 HBDP02042 147 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms