RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FAM74A4Q5TZK3 123 aa6.93□□□□□ -1.3
PDPN-212ENST00000621990 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
PDPN-212ENST00000621990 K7ERJ3 54 aa6.93□□□□□ -1.3
PDPN-212ENST00000621990 FABP2P12104 132 aa6.93□□□□□ -1.3
PDPN-212ENST00000621990 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
PDPN-212ENST00000621990 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
PDPN-212ENST00000621990 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
PDPN-212ENST00000621990 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
PDPN-212ENST00000621990 PTH2Q96A98 100 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 NHP2Q9NX24 153 aaKnown RBP6.92□□□□□ -1.3
PDPN-212ENST00000621990 SPCS1Q9Y6A9 102 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 HIST1H4GQ99525 98 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 LINC00467Q9BRT7 94 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 P0DMU3 169 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 DEFB131AP59861 70 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 TMEM61Q8N0U2 210 aa6.92□□□□□ -1.3
PDPN-212ENST00000621990 I3L3M4 83 aa6.91□□□□□ -1.3
PDPN-212ENST00000621990 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
PDPN-212ENST00000621990 IGLL5B9A064 214 aa6.91□□□□□ -1.3
PDPN-212ENST00000621990 C20orf203Q8NBC4 194 aa6.91□□□□□ -1.3
PDPN-212ENST00000621990 ZNRF2Q8NHG8 242 aa6.91□□□□□ -1.3
PDPN-212ENST00000621990 CLUHP3Q96NS8 147 aa6.91□□□□□ -1.3
PDPN-212ENST00000621990 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
PDPN-212ENST00000621990 HERVK_113P61574 105 aa6.9□□□□□ -1.3
PDPN-212ENST00000621990 DLX4Q92988 240 aaPredicted RBP6.9□□□□□ -1.3
PDPN-212ENST00000621990 MAP6D1Q9H9H5 199 aa6.9□□□□□ -1.3
PDPN-212ENST00000621990 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
PDPN-212ENST00000621990 SORL1Q92673 2214 aa6.9□□□□□ -1.31
PDPN-212ENST00000621990 ITPR3Q14573 2671 aa6.9□□□□□ -1.31
PDPN-212ENST00000621990 DEFB114Q30KQ6 69 aa6.9□□□□□ -1.31
PDPN-212ENST00000621990 TEX29Q8N6K0 151 aa6.9□□□□□ -1.31
PDPN-212ENST00000621990 M0R2P5 195 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
PDPN-212ENST00000621990 A8MWV9 139 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 K7ERU9 68 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 Q6ZSV7 163 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 DEFB104AQ8WTQ1 72 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 AMELXQ99217 191 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
PDPN-212ENST00000621990 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 FHL3Q13643 280 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 C11orf72Q8NBR9 251 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 KLHL30-AS1Q8NEE0 82 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 DUX3Q96PT4 197 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 CUBNO60494 3623 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 A0A0J9YY99 117 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 EMP1P54849 157 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 ZNF479Q96JC4 524 aa6.88□□□□□ -1.31
PDPN-212ENST00000621990 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
PDPN-212ENST00000621990 UBE2D1P51668 147 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 CRYBA4P53673 196 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 DYNLRB2Q8TF09 96 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 FAM104AQ969W3 186 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 TENM4Q6N022 2769 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 EPG5Q9HCE0 2579 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 TRAV25A0A0B4J276 109 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 DNAJC9-AS1A6NH13 148 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
PDPN-212ENST00000621990 SCGB2A2Q13296 93 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 CFAP126Q5VTH2 177 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
PDPN-212ENST00000621990 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 CIDEAO60543 219 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 SAP30O75446 220 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
PDPN-212ENST00000621990 J3QQQ9 107 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 RHODO00212 210 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 INSP01308 110 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 PROK1P58294 105 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 KHDC1LQ5JSQ8 128 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 SPXQ9BT56 116 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 NF1P21359 2839 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 G3V4G9 280 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 LEPROTO15243 131 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 PRM2P04554 102 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 HTN1P15515 57 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
PDPN-212ENST00000621990 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 Q6ZSN1 163 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 ANK3Q12955 4377 aaKnown RBP6.85□□□□□ -1.31
PDPN-212ENST00000621990 PDZD2O15018 2839 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
PDPN-212ENST00000621990 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms