RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 TRBV6-8A0A0A6YYG3 113 aa16.73■□□□□ 0.27
VEGFA-229ENST00000621747 EPM2AB3EWF7 344 aa16.73■□□□□ 0.27
VEGFA-229ENST00000621747 GZMBP10144 247 aa16.73■□□□□ 0.27
VEGFA-229ENST00000621747 P01737 135 aa16.72■□□□□ 0.27
VEGFA-229ENST00000621747 IGLC6P0CF74 106 aa16.72■□□□□ 0.27
VEGFA-229ENST00000621747 KIF25-AS1Q9Y6Z4 181 aa16.72■□□□□ 0.27
VEGFA-229ENST00000621747 RBFOX3A6NFN3 312 aa16.71■□□□□ 0.27
VEGFA-229ENST00000621747 TMEM262E9PQX1 116 aa16.71■□□□□ 0.27
VEGFA-229ENST00000621747 CACNG7P62955 275 aa16.71■□□□□ 0.27
VEGFA-229ENST00000621747 IGKV2D-24A0A075B6R9 120 aa16.7■□□□□ 0.26
VEGFA-229ENST00000621747 WFDC2Q14508 124 aa16.7■□□□□ 0.26
VEGFA-229ENST00000621747 TMEM97Q5BJF2 176 aa16.7■□□□□ 0.26
VEGFA-229ENST00000621747 C9orf62Q8N4C0 152 aa16.7■□□□□ 0.26
VEGFA-229ENST00000621747 UBE2WQ96B02 151 aa16.7■□□□□ 0.26
VEGFA-229ENST00000621747 TMEM70Q9BUB7 260 aa16.7■□□□□ 0.26
VEGFA-229ENST00000621747 TRBV20OR9-2A0A075B6H5 130 aa16.69■□□□□ 0.26
VEGFA-229ENST00000621747 PKIAP61925 76 aa16.69■□□□□ 0.26
VEGFA-229ENST00000621747 F2Z2F3 143 aa16.68■□□□□ 0.26
VEGFA-229ENST00000621747 LECT2O14960 151 aa16.68■□□□□ 0.26
VEGFA-229ENST00000621747 Q0VG73 95 aa16.68■□□□□ 0.26
VEGFA-229ENST00000621747 FRZBQ92765 325 aa16.68■□□□□ 0.26
VEGFA-229ENST00000621747 hCG_2014768A0A024R1R8 64 aa16.67■□□□□ 0.26
VEGFA-229ENST00000621747 MGPP08493 103 aa16.67■□□□□ 0.26
VEGFA-229ENST00000621747 BAALCQ8WXS3 180 aa16.67■□□□□ 0.26
VEGFA-229ENST00000621747 H7C1H1 209 aa16.66■□□□□ 0.26
VEGFA-229ENST00000621747 DNAJC30Q96LL9 226 aa16.66■□□□□ 0.26
VEGFA-229ENST00000621747 CHCHD5Q9BSY4 110 aa16.66■□□□□ 0.26
VEGFA-229ENST00000621747 TRGC1P0CF51 173 aa16.65■□□□□ 0.26
VEGFA-229ENST00000621747 CRPP02741 224 aa16.64■□□□□ 0.25
VEGFA-229ENST00000621747 BLOC1S1P78537 153 aa16.64■□□□□ 0.25
VEGFA-229ENST00000621747 ATRAIDQ6UW56 229 aa16.64■□□□□ 0.25
VEGFA-229ENST00000621747 LYZL1Q6UWQ5 148 aa16.64■□□□□ 0.25
VEGFA-229ENST00000621747 Q8N976 141 aa16.64■□□□□ 0.25
VEGFA-229ENST00000621747 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-229ENST00000621747 M0QY20 66 aa16.63■□□□□ 0.25
VEGFA-229ENST00000621747 MPV17L2Q567V2 206 aa16.63■□□□□ 0.25
VEGFA-229ENST00000621747 Q5VSD8 79 aa16.63■□□□□ 0.25
VEGFA-229ENST00000621747 C15orf54Q8N8G6 183 aa16.63■□□□□ 0.25
VEGFA-229ENST00000621747 NUDT10Q8NFP7 164 aa16.63■□□□□ 0.25
VEGFA-229ENST00000621747 NUDT11Q96G61 164 aa16.63■□□□□ 0.25
VEGFA-229ENST00000621747 ANGP03950 147 aaKnown RBP16.62■□□□□ 0.25
VEGFA-229ENST00000621747 SUMO4Q6EEV6 95 aa16.62■□□□□ 0.25
VEGFA-229ENST00000621747 ALKAL2Q6UX46 152 aa16.62■□□□□ 0.25
VEGFA-229ENST00000621747 C1orf43Q9BWL3 253 aa16.62■□□□□ 0.25
VEGFA-229ENST00000621747 TRBV25-1A0A075B6N4 114 aa16.61■□□□□ 0.25
VEGFA-229ENST00000621747 HAMPP81172 84 aa16.61■□□□□ 0.25
VEGFA-229ENST00000621747 NTM-AS1Q6ZSK4 140 aa16.61■□□□□ 0.25
VEGFA-229ENST00000621747 SMR3BP02814 79 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-229ENST00000621747 NTF3P20783 257 aa16.6■□□□□ 0.25
VEGFA-229ENST00000621747 CTRLP40313 264 aa16.6■□□□□ 0.25
VEGFA-229ENST00000621747 WDR73Q6P4I2 378 aa16.6■□□□□ 0.25
VEGFA-229ENST00000621747 ENHOQ6UWT2 76 aa16.6■□□□□ 0.25
VEGFA-229ENST00000621747 DPH3P1Q9H4G8 78 aa16.6■□□□□ 0.25
VEGFA-229ENST00000621747 RPP21Q9H633 154 aaKnown RBP16.6■□□□□ 0.25
VEGFA-229ENST00000621747 OCC1Q8TAD7 63 aa16.59■□□□□ 0.25
VEGFA-229ENST00000621747 RNASE7Q9H1E1 156 aaKnown RBP16.59■□□□□ 0.25
VEGFA-229ENST00000621747 IGHV1-24A0A0C4DH33 117 aa16.58■□□□□ 0.24
VEGFA-229ENST00000621747 TMEM250H0YL14 139 aa16.58■□□□□ 0.24
VEGFA-229ENST00000621747 K7EN84 100 aa16.58■□□□□ 0.24
VEGFA-229ENST00000621747 RASL11AQ6T310 242 aa16.58■□□□□ 0.24
VEGFA-229ENST00000621747 FAM30AQ9NZY2 134 aa16.58■□□□□ 0.24
VEGFA-229ENST00000621747 FAM229AH3BQW9 127 aa16.57■□□□□ 0.24
VEGFA-229ENST00000621747 GAGE6Q13070 117 aa16.57■□□□□ 0.24
VEGFA-229ENST00000621747 IQCJQ1A5X6 159 aa16.57■□□□□ 0.24
VEGFA-229ENST00000621747 INAFM2P0DMQ5 153 aa16.56■□□□□ 0.24
VEGFA-229ENST00000621747 NKX2-5P52952 324 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-229ENST00000621747 TWIST1Q15672 202 aa16.56■□□□□ 0.24
VEGFA-229ENST00000621747 MIAQ16674 131 aa16.56■□□□□ 0.24
VEGFA-229ENST00000621747 LYPD6BQ8NI32 183 aa16.56■□□□□ 0.24
VEGFA-229ENST00000621747 CNFNQ9BYD5 112 aa16.56■□□□□ 0.24
VEGFA-229ENST00000621747 RBX1P62877 108 aa16.55■□□□□ 0.24
VEGFA-229ENST00000621747 C14orf177Q52M58 125 aa16.55■□□□□ 0.24
VEGFA-229ENST00000621747 NIT2Q9NQR4 276 aa16.55■□□□□ 0.24
VEGFA-229ENST00000621747 DNAH8Q96JB1 4490 aa16.55■□□□□ 0.24
VEGFA-229ENST00000621747 FAT1Q14517 4588 aa16.54■□□□□ 0.24
VEGFA-229ENST00000621747 Q6ZSA8 131 aa16.53■□□□□ 0.24
VEGFA-229ENST00000621747 VPS13BQ7Z7G8 4022 aa16.53■□□□□ 0.24
VEGFA-229ENST00000621747 PRR34Q9NV39 138 aa16.52■□□□□ 0.24
VEGFA-229ENST00000621747 GATCO43716 136 aaKnown RBP16.51■□□□□ 0.23
VEGFA-229ENST00000621747 CEBPGP53567 150 aa16.51■□□□□ 0.23
VEGFA-229ENST00000621747 LINC00269Q8N2A0 174 aa16.51■□□□□ 0.23
VEGFA-229ENST00000621747 PGLYRP4Q96LB8 373 aa16.51■□□□□ 0.23
VEGFA-229ENST00000621747 TMEM243Q9BU79 118 aa16.51■□□□□ 0.23
VEGFA-229ENST00000621747 HLA-DQA1P01909 254 aa16.5■□□□□ 0.23
VEGFA-229ENST00000621747 FAM231DQ6ZW35 169 aa16.5■□□□□ 0.23
VEGFA-229ENST00000621747 SMIM15Q7Z3B0 74 aa16.5■□□□□ 0.23
VEGFA-229ENST00000621747 LINC01620Q4KN68 170 aa16.49■□□□□ 0.23
VEGFA-229ENST00000621747 CLPSL2Q6UWE3 100 aa16.49■□□□□ 0.23
VEGFA-229ENST00000621747 GTSF1Q8WW33 167 aa16.49■□□□□ 0.23
VEGFA-229ENST00000621747 EIF5A2Q9GZV4 153 aaKnown RBP16.49■□□□□ 0.23
VEGFA-229ENST00000621747 A8MWL6 223 aa16.47■□□□□ 0.23
VEGFA-229ENST00000621747 NDUFS6O75380 124 aaKnown RBP16.47■□□□□ 0.23
VEGFA-229ENST00000621747 COTL1Q14019 142 aa16.47■□□□□ 0.23
VEGFA-229ENST00000621747 USP17L23D6RBM5 183 aa16.46■□□□□ 0.23
VEGFA-229ENST00000621747 UBE2L6O14933 153 aa16.46■□□□□ 0.23
VEGFA-229ENST00000621747 REG3AQ06141 175 aa16.46■□□□□ 0.23
VEGFA-229ENST00000621747 GATD1Q8NB37 220 aa16.46■□□□□ 0.23
VEGFA-229ENST00000621747 A0A1B0GUV1 79 aa16.45■□□□□ 0.22
VEGFA-229ENST00000621747 CT83Q5H943 113 aa16.45■□□□□ 0.22
VEGFA-229ENST00000621747 FAM210AQ96ND0 272 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms