RNA–Protein interactions for RNA: ENST00000620895.1

PMPCA-211, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 3

Gene PMPCA, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-211ENST00000620895 S100PP25815 95 aa12.71□□□□□ -0.37
PMPCA-211ENST00000620895 GATD1Q8NB37 220 aa12.71□□□□□ -0.37
PMPCA-211ENST00000620895 VPS13DQ5THJ4 4388 aa12.7□□□□□ -0.38
PMPCA-211ENST00000620895 S100A8P05109 93 aa12.7□□□□□ -0.38
PMPCA-211ENST00000620895 RAB4AP20338 218 aa12.7□□□□□ -0.38
PMPCA-211ENST00000620895 MRPL23Q16540 153 aaKnown RBP12.7□□□□□ -0.38
PMPCA-211ENST00000620895 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
PMPCA-211ENST00000620895 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 TRBV10-1A0A0K0K1A3 114 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 LINC00694P0DN24 101 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 GAGE1Q13065 139 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 GAGE4Q13068 117 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 GAGE5Q13069 117 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 GAGE13Q4V321 117 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 FAM104BQ5XKR9 115 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 NEXN-AS1Q8NBZ9 246 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 DNAH6Q9C0G6 4158 aa12.69□□□□□ -0.38
PMPCA-211ENST00000620895 SRIP30626 198 aa12.67□□□□□ -0.38
PMPCA-211ENST00000620895 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
PMPCA-211ENST00000620895 ZNRF2Q8NHG8 242 aa12.67□□□□□ -0.38
PMPCA-211ENST00000620895 H7C1H1 209 aa12.66□□□□□ -0.38
PMPCA-211ENST00000620895 GAS8-AS1O95177 125 aa12.66□□□□□ -0.38
PMPCA-211ENST00000620895 ELOBQ15370 118 aa12.66□□□□□ -0.38
PMPCA-211ENST00000620895 MRPL51Q4U2R6 128 aaKnown RBP12.66□□□□□ -0.38
PMPCA-211ENST00000620895 NEGR1Q7Z3B1 354 aa12.66□□□□□ -0.38
PMPCA-211ENST00000620895 YPEL4Q96NS1 127 aa12.66□□□□□ -0.38
PMPCA-211ENST00000620895 TRBV7-3A0A075B6L6 115 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 TGIF2-C20orf24A0A0A6YYL0 155 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
PMPCA-211ENST00000620895 ESRGQ1W209 222 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 TMEM136Q6ZRR5 245 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 CBLN2Q8IUK8 224 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 FRZBQ92765 325 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
PMPCA-211ENST00000620895 MRAP2Q96G30 205 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 NIT2Q9NQR4 276 aa12.65□□□□□ -0.38
PMPCA-211ENST00000620895 SMKR1H3BMG3 65 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 UBE2D3P61077 147 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 UBE2D2P62837 147 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 LYPD5Q6UWN5 251 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 SH2D6Q7Z4S9 175 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 ATP6V0E2Q8NHE4 81 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
PMPCA-211ENST00000620895 DNAJC30Q96LL9 226 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 SMCO4Q9NRQ5 59 aa12.64□□□□□ -0.39
PMPCA-211ENST00000620895 TRBV24-1A0A075B6N3 115 aa12.62□□□□□ -0.39
PMPCA-211ENST00000620895 ATP6V1G1O75348 118 aa12.62□□□□□ -0.39
PMPCA-211ENST00000620895 NCR2O95944 276 aa12.62□□□□□ -0.39
PMPCA-211ENST00000620895 RPS10P46783 165 aaKnown RBP12.62□□□□□ -0.39
PMPCA-211ENST00000620895 UBE2DNLQ8IWF7 75 aa12.62□□□□□ -0.39
PMPCA-211ENST00000620895 LINC00588Q9Y4M8 146 aa12.62□□□□□ -0.39
PMPCA-211ENST00000620895 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
PMPCA-211ENST00000620895 GNB1LQ9BYB4 327 aa12.61□□□□□ -0.39
PMPCA-211ENST00000620895 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
PMPCA-211ENST00000620895 PCLOQ9Y6V0 5065 aa12.6□□□□□ -0.39
PMPCA-211ENST00000620895 CCL18P55774 89 aa12.6□□□□□ -0.39
PMPCA-211ENST00000620895 TIRAPP58753 221 aa12.6□□□□□ -0.39
PMPCA-211ENST00000620895 OR10J3Q5JRS4 329 aa12.6□□□□□ -0.39
PMPCA-211ENST00000620895 NRACQ8N912 160 aa12.6□□□□□ -0.39
PMPCA-211ENST00000620895 KIAA1109Q2LD37 5005 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 IGHV3-38A0A0C4DH36 116 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 TRBV6-5A0A0K0K1A5 114 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 A0A1B0GVY2 172 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 D6R8Y8 96 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 SCO1O75880 301 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 S100A1P23297 94 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 CKS2P33552 79 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 COX19Q49B96 90 aa12.59□□□□□ -0.39
PMPCA-211ENST00000620895 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
PMPCA-211ENST00000620895 MRPS16Q9Y3D3 137 aaKnown RBP12.58□□□□□ -0.4
PMPCA-211ENST00000620895 PPBPP02775 128 aa12.57□□□□□ -0.4
PMPCA-211ENST00000620895 DAZ4Q86SG3 579 aaKnown RBP12.57□□□□□ -0.4
PMPCA-211ENST00000620895 DAZ3Q9NR90 486 aaKnown RBP12.57□□□□□ -0.4
PMPCA-211ENST00000620895 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
PMPCA-211ENST00000620895 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
PMPCA-211ENST00000620895 APCSP02743 223 aa12.56□□□□□ -0.4
PMPCA-211ENST00000620895 ORMDL3Q8N138 153 aa12.56□□□□□ -0.4
PMPCA-211ENST00000620895 ST20Q9HBF5 79 aa12.56□□□□□ -0.4
PMPCA-211ENST00000620895 TNFRSF6BO95407 300 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 PPP1R17O96001 155 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 NPYP01303 97 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 MT-ND6P03923 174 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
PMPCA-211ENST00000620895 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 LELP1Q5T871 98 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 PRELID3AQ96N28 172 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
PMPCA-211ENST00000620895 MRPL18Q9H0U6 180 aaKnown RBP12.55□□□□□ -0.4
PMPCA-211ENST00000620895 M0R2N4 97 aa12.54□□□□□ -0.4
PMPCA-211ENST00000620895 RTL8CO15255 209 aa12.54□□□□□ -0.4
PMPCA-211ENST00000620895 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
PMPCA-211ENST00000620895 FAT2Q9NYQ8 4349 aa12.53□□□□□ -0.4
PMPCA-211ENST00000620895 PHOX2AO14813 284 aa12.53□□□□□ -0.4
PMPCA-211ENST00000620895 SUMO2P61956 95 aaKnown RBP12.53□□□□□ -0.4
PMPCA-211ENST00000620895 FABP9Q0Z7S8 132 aa12.53□□□□□ -0.4
PMPCA-211ENST00000620895 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms