RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 HERVK_113P63121 156 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 TMEM263Q8WUH6 116 aaKnown RBP7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 H7C423 109 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 SBSPONQ8IVN8 264 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 NOTCH2Q04721 2471 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 PPP1R17O96001 155 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 C8orf31Q8N9H6 132 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 POLQO75417 2590 aa7.38□□□□□ -1.23
TNFAIP3-210ENST00000620204 TSHBP01222 138 aa7.38□□□□□ -1.23
TNFAIP3-210ENST00000620204 TMEM190Q8WZ59 177 aa7.38□□□□□ -1.23
TNFAIP3-210ENST00000620204 TIMM21Q9BVV7 248 aa7.38□□□□□ -1.23
TNFAIP3-210ENST00000620204 ZNF876PQ49A33 203 aa7.38□□□□□ -1.23
TNFAIP3-210ENST00000620204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 SONP18583 2426 aaKnown RBP7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 TRAV13-1A0A0B4J241 112 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 CD28P10747 220 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 RNF5Q99942 180 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 NDUFA12Q9UI09 145 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 E7EQL1 145 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 GNLYP22749 145 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 SRSF2Q01130 221 aaKnown RBP7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 Q6Q795 121 aa7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
TNFAIP3-210ENST00000620204 LRBAP50851 2863 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGHV3OR16-10A0A075B7F0 116 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 PRB1P04280 392 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 COX8CQ7Z4L0 72 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 A0A0J9YXY3 114 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 NUP37Q8NFH4 326 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 LEPROTO15243 131 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 RHOHQ15669 191 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 CCDC168Q8NDH2 2452 aa7.36□□□□□ -1.23
TNFAIP3-210ENST00000620204 hADV29S1A0JD25 119 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 NDUFA7O95182 113 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 A0A0B4J2C4 111 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 CLPSL1A2RUU4 121 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGIPA6NJ69 53 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 P0DMU3 169 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 FAM231AP0DMU4 169 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 FAM231CP0DMU5 169 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 TMEM219Q86XT9 240 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 SPANXA1Q9NS26 97 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 MYO9AB2RTY4 2548 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 I3L3M4 83 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 CDSNQ15517 529 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 KAAG1Q9UBP8 84 aa7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 SETD2Q9BYW2 2564 aaPredicted RBP7.35□□□□□ -1.23
TNFAIP3-210ENST00000620204 TRAV12-2A0A075B6T6 113 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 NSUN5P1Q3KNT7 163 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 ASH1LQ9NR48 2969 aaKnown RBP7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGHV7-81A0A0B4J1V7 117 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 M0R1W7 72 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 C5orf47Q569G3 176 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 DGAT2L7PQ6IED9 249 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 VMO1Q7Z5L0 202 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 LINC01587Q99440 93 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 MDFICQ9P1T7 246 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGHV1-69DA0A0B4J2H0 117 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 C9orf47Q6ZRZ4 202 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 USP9YO00507 2555 aaPredicted RBP7.34□□□□□ -1.23
TNFAIP3-210ENST00000620204 IGKV3D-7A0A0C4DH55 119 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 J3KT08 172 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 ABCA12Q86UK0 2595 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 H3BT86 120 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 ZNF672Q499Z4 452 aaPredicted RBP7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 ADAMTSL4-AS1Q5T5F5 129 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 OR13C6PQ8NH95 151 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 MUC4Q99102 2169 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 SVEP1Q4LDE5 3571 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 SMIM9A6NGZ8 99 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 KNCNA6PVL3 124 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 DNAJC30Q96LL9 226 aa7.33□□□□□ -1.24
TNFAIP3-210ENST00000620204 TMEM223A0PJW6 202 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 ZFAND2AQ8N6M9 145 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 KLK9Q9UKQ9 250 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 TLN2Q9Y4G6 2542 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 C9orf139Q6ZV77 190 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 USP9XQ93008 2570 aaPredicted RBP7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 FLNCQ14315 2725 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 UQCRQO14949 82 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 NXPH4O95158 308 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 PF4V1P10720 104 aa7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 RNASE3P12724 160 aaKnown RBP7.32□□□□□ -1.24
TNFAIP3-210ENST00000620204 NRGNQ92686 78 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms