RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 NIT2Q9NQR4 276 aa4.19□□□□□ -1.74
SSX4B-202ENST00000619890 HHLA3Q9XRX5 114 aa4.19□□□□□ -1.74
SSX4B-202ENST00000619890 LINC00588Q9Y4M8 146 aa4.19□□□□□ -1.74
SSX4B-202ENST00000619890 IGLV2-18A0A075B6J9 118 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 A0A096LPF7 62 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 TRAV34A0A0B4J273 112 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 NBDYA0A0U1RRE5 68 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 GAGE10A6NGK3 116 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 C16orf90A8MZG2 172 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 PPP1R2P9O14990 202 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 PAGE4O60829 102 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 IGHV3-53P01767 116 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 CXCL1P09341 107 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 SRIP30626 198 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 CTAG1AP78358 180 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 MEF2BQ02080 365 aaPredicted RBP4.18□□□□□ -1.74
SSX4B-202ENST00000619890 FHL2Q14192 279 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 RHOHQ15669 191 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 ADIRFQ15847 76 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 ZNF876PQ49A33 203 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 DNLZQ5SXM8 178 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 SYT8Q8NBV8 401 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 SMIM12Q96EX1 92 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 ZNF479Q96JC4 524 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 BTF3L4Q96K17 158 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 LINC00479Q96M42 142 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 IL36BQ9NZH7 164 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 URGCP-MRPS24S4R325 110 aa4.18□□□□□ -1.74
SSX4B-202ENST00000619890 TRBV24-1A0A075B6N3 115 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 TGIF2-C20orf24A0A0A6YYL0 155 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 A8MWV9 139 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 K7EP13 123 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 M0R2N4 97 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 RHODO00212 210 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 GNRH2O43555 120 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 PDE6DO43924 150 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 SH2D1AO60880 128 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 MGST1P10620 155 aaKnown RBP4.17□□□□□ -1.74
SSX4B-202ENST00000619890 RNASE3P12724 160 aaKnown RBP4.17□□□□□ -1.74
SSX4B-202ENST00000619890 GATA1P15976 413 aaPredicted RBP4.17□□□□□ -1.74
SSX4B-202ENST00000619890 C1orf134Q5TEV5 83 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 ZFP2Q6ZN57 461 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 NEGR1Q7Z3B1 354 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 C11orf52Q96A22 123 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 PRADC1Q9BSG0 188 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 C11orf21Q9P2W6 132 aa4.17□□□□□ -1.74
SSX4B-202ENST00000619890 H3BVH4 76 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 K7EQD1 137 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 SIVA1O15304 175 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 RS1O15537 224 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 TRGC2P03986 189 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 ESRGQ1W209 222 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 CFAP126Q5VTH2 177 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 KCNIP4Q6PIL6 250 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 C6orf223Q8N319 242 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 Q9H8V8 135 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 PHLDA3Q9Y5J5 127 aa4.16□□□□□ -1.74
SSX4B-202ENST00000619890 HIST1H2BKO60814 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 NXPH4O95158 308 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BJP06899 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 TRGC1P0CF51 173 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BOP23527 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BBP33778 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 CRIP1P50238 77 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BDP58876 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 SUMO2P61956 95 aaKnown RBP4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BCP62807 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 RPL23P62829 140 aaKnown RBP4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST2H2BEQ16778 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.15□□□□□ -1.75
SSX4B-202ENST00000619890 BAGE2Q86Y30 109 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 NHLRC2Q8NBF2 726 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BHQ93079 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BNQ99877 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BMQ99879 126 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 MLST8Q9BVC4 326 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 PARLQ9H300 379 aa4.15□□□□□ -1.75
SSX4B-202ENST00000619890 TRAV9-2A0A087WT02 112 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 OR5AL1P0C617 328 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 ARMS2P0C7Q2 107 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 GNG4P50150 75 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 CENPWQ5EE01 88 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 SERTAD4-AS1Q5TG53 156 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 PRR27Q6MZM9 219 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 LYPD5Q6UWN5 251 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 HIST3H2BBQ8N257 126 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 C10orf126Q8N4M7 172 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 SLC25A29Q8N8R3 303 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 OR10D4PQ8NGN7 298 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 FRZBQ92765 325 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 IMMP2LQ96T52 175 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 LY96Q9Y6Y9 160 aa4.14□□□□□ -1.75
SSX4B-202ENST00000619890 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 TRAV9-1A0A075B6T8 112 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 TMSB15BA0A087X1C1 80 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms