RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
TP53-223ENST00000618944 TAL2Q16559 108 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 DEFB113Q30KQ7 82 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 NBPF19A0A087WUL8 3843 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 TRBV6-5A0A0K0K1A5 114 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 P0DMU3 169 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 TLN2Q9Y4G6 2542 aa8.25□□□□□ -1.09
TP53-223ENST00000618944 OR5A1Q8NGJ0 315 aa8.24□□□□□ -1.09
TP53-223ENST00000618944 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
TP53-223ENST00000618944 TMEM141Q96I45 108 aa8.24□□□□□ -1.09
TP53-223ENST00000618944 MYO9AB2RTY4 2548 aa8.24□□□□□ -1.09
TP53-223ENST00000618944 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
TP53-223ENST00000618944 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
TP53-223ENST00000618944 TRPT1Q86TN4 253 aaKnown RBP8.24□□□□□ -1.09
TP53-223ENST00000618944 GTSF1LQ9H1H1 148 aa8.24□□□□□ -1.09
TP53-223ENST00000618944 LINC01619G3V211 115 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 TMEM61Q8N0U2 210 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 ZNF479Q96JC4 524 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 TRGV11A0A075B6L2 103 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 RBMY1BA6NDE4 496 aaKnown RBP8.23□□□□□ -1.09
TP53-223ENST00000618944 RBMY1EA6NEQ0 496 aaKnown RBP8.23□□□□□ -1.09
TP53-223ENST00000618944 H3BMM0 161 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 RBMY1DP0C7P1 496 aaKnown RBP8.23□□□□□ -1.09
TP53-223ENST00000618944 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 C11orf44Q8N8P7 122 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 DLX4Q92988 240 aaPredicted RBP8.23□□□□□ -1.09
TP53-223ENST00000618944 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
TP53-223ENST00000618944 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 Q9UF83 564 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 AKAP9Q99996 3911 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 I3L3M4 83 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 HERVK_113P61574 105 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 SMAGPQ0VAQ4 97 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 SFTA2Q6UW10 78 aa8.22□□□□□ -1.09
TP53-223ENST00000618944 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
TP53-223ENST00000618944 PRRC2AP48634 2157 aaKnown RBP8.21□□□□□ -1.09
TP53-223ENST00000618944 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.09
TP53-223ENST00000618944 H3BMG7 143 aa8.21□□□□□ -1.09
TP53-223ENST00000618944 WFDC2Q14508 124 aa8.21□□□□□ -1.1
TP53-223ENST00000618944 PAPPA-AS1Q5QFB9 102 aa8.21□□□□□ -1.1
TP53-223ENST00000618944 DYNLRB2Q8TF09 96 aa8.21□□□□□ -1.1
TP53-223ENST00000618944 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 Q6ZSN1 163 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 SH2D6Q7Z4S9 175 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 PEMTQ9UBM1 199 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 CR1P17927 2039 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 EPG5Q9HCE0 2579 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 A0A1W2PRX2 142 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 RHOHQ15669 191 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 RRN3P1Q2M238 152 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 NSUN5P1Q3KNT7 163 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
TP53-223ENST00000618944 LINC01587Q99440 93 aa8.2□□□□□ -1.1
TP53-223ENST00000618944 APCP25054 2843 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 A0A0J9YY99 117 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 APOMO95445 188 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 AZU1P20160 251 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 Q8N2B8 174 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 NF1P21359 2839 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 A0A0J9YXV3 536 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 RNASE13Q5GAN3 156 aaKnown RBP8.19□□□□□ -1.1
TP53-223ENST00000618944 HIST2H2BCQ6DN03 193 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 SPAG8Q99932 426 aaPredicted RBP8.19□□□□□ -1.1
TP53-223ENST00000618944 VCX2Q9H322 139 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 MAP6D1Q9H9H5 199 aa8.19□□□□□ -1.1
TP53-223ENST00000618944 MRPL16Q9NX20 251 aaKnown RBP8.19□□□□□ -1.1
TP53-223ENST00000618944 CHD6Q8TD26 2715 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 A0A1B0GWB2 263 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 J3QQQ9 107 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 INSL3P51460 131 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 DEFB114Q30KQ6 69 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 TSSC4Q9Y5U2 329 aaPredicted RBP8.18□□□□□ -1.1
TP53-223ENST00000618944 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 M0R2P5 195 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 CD28P10747 220 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
TP53-223ENST00000618944 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
TP53-223ENST00000618944 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
TP53-223ENST00000618944 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
TP53-223ENST00000618944 CCDC168Q8NDH2 2452 aa8.17□□□□□ -1.1
TP53-223ENST00000618944 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
TP53-223ENST00000618944 Q6ZSV7 163 aa8.17□□□□□ -1.1
TP53-223ENST00000618944 XCL2Q9UBD3 114 aa8.17□□□□□ -1.1
TP53-223ENST00000618944 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 TMEM223A0PJW6 202 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 A6NJY4 79 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 LRRC75A-AS1Q8N1F1 130 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 AMELXQ99217 191 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 SPXQ9BT56 116 aa8.16□□□□□ -1.1
TP53-223ENST00000618944 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms