RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ZNF142P52746 1687 aaPredicted RBP0.52□□□□□ -2.33
TARDBP-220ENST00000618606 BCORL1Q5H9F3 1711 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 LAMB1P07942 1786 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 ATG2AQ2TAZ0 1938 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 TRGV1A0A0A0MS02 117 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 TRAV13-2A0A0B4J235 113 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 SIX6O95475 246 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 TNFP01375 233 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 TPPP2P59282 170 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 PPP3R1P63098 170 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 C10orf128Q5T292 105 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 FAM74A4Q5TZK3 123 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 ZNF818PQ6ZRF7 136 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 SMG6Q86US8 1419 aaKnown RBP0.51□□□□□ -2.33
TARDBP-220ENST00000618606 NALCNQ8IZF0 1738 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 ASCC3Q8N3C0 2202 aaKnown RBP0.51□□□□□ -2.33
TARDBP-220ENST00000618606 PPP1R1CQ8WVI7 109 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 MED12Q93074 2177 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 TSLPQ969D9 159 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 PPP3R2Q96LZ3 170 aa0.51□□□□□ -2.33
TARDBP-220ENST00000618606 ARAP2Q8WZ64 1704 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 NRXN2Q9P2S2 1712 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 QRICH2Q9H0J4 1663 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 ACYP2P14621 99 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 GNG4P50150 75 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 C12orf73Q69YU5 71 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 TTC9CQ8N5M4 171 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 LINC00474Q9P2X8 69 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 MYH7P12883 1935 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 LOC285556D6RIA3 1793 aa0.5□□□□□ -2.33
TARDBP-220ENST00000618606 MYOM2P54296 1465 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 WDR7Q9Y4E6 1490 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 CPSF1Q10570 1443 aaKnown RBP0.49□□□□□ -2.33
TARDBP-220ENST00000618606 KTN1Q86UP2 1357 aaKnown RBP0.49□□□□□ -2.33
TARDBP-220ENST00000618606 GVQW2A0A096LPI5 108 aaPredicted RBP0.49□□□□□ -2.33
TARDBP-220ENST00000618606 ATP6V1G2-DDX39BF2Z307 99 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 S100PP25815 95 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 WHAMMP3Q1A5X7 153 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 C14orf144Q96I85 54 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 C12orf57Q99622 126 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 CGREF1Q99674 301 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 FAM103A1Q9BTL3 118 aaKnown RBP0.49□□□□□ -2.33
TARDBP-220ENST00000618606 SPANXDQ9BXN6 97 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 IER3IP1Q9Y5U9 82 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 PHIPQ8WWQ0 1821 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 ABCA4P78363 2273 aa0.49□□□□□ -2.33
TARDBP-220ENST00000618606 FBN2P35556 2912 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 TRAV1-2A0A0B4J238 106 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 C20orf202A1L168 122 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 F2Z2F3 143 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 PPP1R17O96001 155 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 SPTBP11277 2137 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 FXYD6P3P58550 94 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 MRPS10P82664 201 aaKnown RBP0.48□□□□□ -2.33
TARDBP-220ENST00000618606 C5orf38Q86SI9 138 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 C8orf59Q8N0T1 100 aaPredicted RBP0.48□□□□□ -2.33
TARDBP-220ENST00000618606 SVBPQ8N300 66 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 AQP10Q96PS8 301 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 WFDC6Q9BQY6 131 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 DPH3P1Q9H4G8 78 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 CUL7Q14999 1698 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 ROBO1Q9Y6N7 1651 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 MEGF8Q7Z7M0 2845 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 ZNF469Q96JG9 3925 aaPredicted RBP0.48□□□□□ -2.33
TARDBP-220ENST00000618606 ZMYM4Q5VZL5 1548 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 PZPP20742 1482 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 ARFGEF1Q9Y6D6 1849 aa0.48□□□□□ -2.33
TARDBP-220ENST00000618606 ASH1LQ9NR48 2969 aaKnown RBP0.47□□□□□ -2.33
TARDBP-220ENST00000618606 PIGBOS1A0A0B4J2F0 54 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 IFITM1P13164 125 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 BPESC1Q9GZL8 116 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 C10orf95Q9H7T3 257 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 SSC5DA1L4H1 1573 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 ESPL1Q14674 2120 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 PPIP5K1Q6PFW1 1433 aa0.47□□□□□ -2.33
TARDBP-220ENST00000618606 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
TARDBP-220ENST00000618606 ZDBF2Q9HCK1 2354 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 GPR98Q8WXG9 6306 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 FAM24AA6NFZ4 105 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 SPINK8P0C7L1 97 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 CCL18P55774 89 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 Q6ZRX8 168 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 COMMD6Q7Z4G1 85 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 VMO1Q7Z5L0 202 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 SMIM11BQ8TCY0 68 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 TNS1Q9HBL0 1735 aaKnown RBP0.46□□□□□ -2.34
TARDBP-220ENST00000618606 MRC1P22897 1456 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 TANC1Q9C0D5 1861 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
TARDBP-220ENST00000618606 EIF4G3O43432 1585 aaKnown RBP0.45□□□□□ -2.34
TARDBP-220ENST00000618606 SPAG17Q6Q759 2223 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 TRBV7-3A0A075B6L6 115 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 UBE2L5PA0A1B0GUS4 154 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 TMEM14DPA8MWL7 114 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 SSSCA1O60232 199 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 UBE2L3P68036 154 aaKnown RBP0.45□□□□□ -2.34
TARDBP-220ENST00000618606 SPAG11BQ08648 103 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 HSD52Q0P140 79 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms