RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 DIRAS2Q96HU8 199 aa2.77□□□□□ -1.97
SNCA-213ENST00000618500 IGHV3-73A0A0B4J1V6 119 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 IGKV3D-20A0A0C4DH25 116 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 IGHV1-24A0A0C4DH33 117 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 F6UZH7 168 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 H7C423 109 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 ATP6V1G2O95670 118 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 SNRPCP09234 159 aaKnown RBP2.76□□□□□ -1.97
SNCA-213ENST00000618500 REG3AQ06141 175 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 LGALSLQ3ZCW2 172 aaPredicted RBP2.76□□□□□ -1.97
SNCA-213ENST00000618500 TCEAL7Q9BRU2 100 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 TRBV25-1A0A075B6N4 114 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 PTTG1O95997 202 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 TCRAP04437 139 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 KRTAP1-4P0C5Y4 121 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 PRNTQ86SH4 94 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 FLVCR2Q9UPI3 526 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 PSG8Q9UQ74 426 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 V9GYH0 126 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 A0A096LNI7 61 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 TMBIM6P55061 237 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 RANP62826 216 aaKnown RBP2.76□□□□□ -1.97
SNCA-213ENST00000618500 ZNF674Q2M3X9 581 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 NTM-AS1Q6ZSK4 140 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 GOLT1AQ6ZVE7 132 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 C20orf203Q8NBC4 194 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 AQP10Q96PS8 301 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 MBD2Q9UBB5 411 aa2.76□□□□□ -1.97
SNCA-213ENST00000618500 FABP5P3A8MUU1 101 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 SNAI2O43623 268 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 BCAP31P51572 246 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 LINC00269Q8N2A0 174 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 GTSF1Q8WW33 167 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 OR7C2O60412 319 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 GCGP01275 180 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 IGLV7-43P04211 117 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 RAB2AP61019 212 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 FLI1Q01543 452 aaPredicted RBP2.75□□□□□ -1.97
SNCA-213ENST00000618500 GCSAMLQ5JQS6 135 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 Q9UF83 564 aa2.75□□□□□ -1.97
SNCA-213ENST00000618500 RGS5O15539 181 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 BTCP35070 178 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 PCP4P48539 62 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 SUMO2P61956 95 aaKnown RBP2.74□□□□□ -1.97
SNCA-213ENST00000618500 FAM162BQ5T6X4 162 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 IGHV1-58A0A0C4DH39 117 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 LOC107984640A0A0U1RRK4 108 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 GAGE12HA6NDE8 117 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 TMEM262E9PQX1 116 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 CST7O76096 145 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 COX6A2Q02221 97 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 PRSS3P2Q8NHM4 247 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 ISOC2Q96AB3 205 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 LINC00526Q96FQ7 95 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 ZFP30Q9Y2G7 519 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 FAM25EA8MYX2 175 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 B4DEV8 164 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 NCR2O95944 276 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 CFC1BP0CG36 223 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 TPT1P13693 172 aaKnown RBP2.74□□□□□ -1.97
SNCA-213ENST00000618500 INO80EQ8NBZ0 244 aaPredicted RBP2.74□□□□□ -1.97
SNCA-213ENST00000618500 OR2T35Q8NGX2 323 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 CHCHD5Q9BSY4 110 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 ARL2-SNX15V9GYD0 113 aa2.74□□□□□ -1.97
SNCA-213ENST00000618500 TRAV1-1A0A0B4J248 108 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 H3BMQ9 156 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 S100A4P26447 101 aaKnown RBP2.73□□□□□ -1.97
SNCA-213ENST00000618500 Q86TA4 180 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 CARD19Q96LW7 228 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 NMES1Q9C002 83 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 NKX6-2Q9C056 277 aaPredicted RBP2.73□□□□□ -1.97
SNCA-213ENST00000618500 NAA50Q9GZZ1 169 aaKnown RBP2.73□□□□□ -1.97
SNCA-213ENST00000618500 TMEM167BQ9NRX6 74 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 EPDR1Q9UM22 224 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 LSM5Q9Y4Y9 91 aaKnown RBP2.73□□□□□ -1.97
SNCA-213ENST00000618500 A0A1W2PRE2 83 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 CCL25O15444 150 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 OR5AL1P0C617 328 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 ARMS2P0C7Q2 107 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 STAG3L2P0CL84 134 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 STAG3L3P0CL85 134 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 FOXI1Q12951 378 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 PRR26Q8N8Z3 221 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 TMEM243Q9BU79 118 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 MLST8Q9BVC4 326 aa2.73□□□□□ -1.97
SNCA-213ENST00000618500 MUC21A0A0G2JKD1 596 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 KRTAP23-1A1A580 65 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 MT-ND6P03923 174 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 FGF6P10767 208 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 ZNF25P17030 456 aaPredicted RBP2.72□□□□□ -1.97
SNCA-213ENST00000618500 AMTP48728 403 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 PRR4Q16378 134 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 C2orf48Q96LS8 159 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 DERL1Q9BUN8 251 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 CTDSP1Q9GZU7 261 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 JPT2Q9H910 190 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 HSPB11Q9Y547 144 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 PHLDA3Q9Y5J5 127 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 H3BVH4 76 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms