RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
MALAT1-213ENST00000618227 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
MALAT1-213ENST00000618227 NIT2Q9NQR4 276 aa10.98□□□□□ -0.65
MALAT1-213ENST00000618227 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
MALAT1-213ENST00000618227 HLA-DQA1P01909 254 aa10.97□□□□□ -0.65
MALAT1-213ENST00000618227 MT-ND6P03923 174 aa10.97□□□□□ -0.65
MALAT1-213ENST00000618227 NEXN-AS1Q8NBZ9 246 aa10.97□□□□□ -0.65
MALAT1-213ENST00000618227 MRPL51Q4U2R6 128 aaKnown RBP10.96□□□□□ -0.65
MALAT1-213ENST00000618227 TMEM136Q6ZRR5 245 aa10.96□□□□□ -0.65
MALAT1-213ENST00000618227 TNFRSF18Q9Y5U5 241 aa10.96□□□□□ -0.65
MALAT1-213ENST00000618227 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
MALAT1-213ENST00000618227 LOC100131303A0A0U1RQF7 123 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 PHOX2AO14813 284 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 ATP6V1G1O75348 118 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 P0DMU3 169 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 FAM231AP0DMU4 169 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 FAM231CP0DMU5 169 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 UBE2D3P61077 147 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 UBE2D2P62837 147 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 DAZ4Q86SG3 579 aaKnown RBP10.95□□□□□ -0.66
MALAT1-213ENST00000618227 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.95□□□□□ -0.66
MALAT1-213ENST00000618227 ATP6V0E2Q8NHE4 81 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 ZNRF2Q8NHG8 242 aa10.95□□□□□ -0.66
MALAT1-213ENST00000618227 DAZ3Q9NR90 486 aaKnown RBP10.95□□□□□ -0.66
MALAT1-213ENST00000618227 GAGE12JA6NER3 117 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 CKS2P33552 79 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 CCL18P55774 89 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 GAGE1Q13065 139 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 GAGE4Q13068 117 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 GAGE5Q13069 117 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 GAGE13Q4V321 117 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 Q9UF83 564 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
MALAT1-213ENST00000618227 TGIF2-C20orf24A0A0A6YYL0 155 aa10.93□□□□□ -0.66
MALAT1-213ENST00000618227 TRAV26-2A0A0B4J265 109 aa10.93□□□□□ -0.66
MALAT1-213ENST00000618227 LGALS9CQ6DKI2 356 aa10.93□□□□□ -0.66
MALAT1-213ENST00000618227 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
MALAT1-213ENST00000618227 ORMDL3Q8N138 153 aa10.93□□□□□ -0.66
MALAT1-213ENST00000618227 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
MALAT1-213ENST00000618227 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
MALAT1-213ENST00000618227 OR10J3Q5JRS4 329 aa10.92□□□□□ -0.66
MALAT1-213ENST00000618227 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
MALAT1-213ENST00000618227 NRACQ8N912 160 aa10.92□□□□□ -0.66
MALAT1-213ENST00000618227 C20orf78Q9BR46 151 aa10.92□□□□□ -0.66
MALAT1-213ENST00000618227 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
MALAT1-213ENST00000618227 APCSP02743 223 aa10.91□□□□□ -0.66
MALAT1-213ENST00000618227 ESRGQ1W209 222 aa10.91□□□□□ -0.66
MALAT1-213ENST00000618227 ST20Q9HBF5 79 aa10.91□□□□□ -0.66
MALAT1-213ENST00000618227 PRSS47A8MTI9 375 aa10.9□□□□□ -0.66
MALAT1-213ENST00000618227 D6R8Y8 96 aa10.9□□□□□ -0.66
MALAT1-213ENST00000618227 POLR2KP53803 58 aaKnown RBP10.9□□□□□ -0.66
MALAT1-213ENST00000618227 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
MALAT1-213ENST00000618227 UPK3BQ9BT76 320 aa10.9□□□□□ -0.66
MALAT1-213ENST00000618227 MRPS16Q9Y3D3 137 aaKnown RBP10.9□□□□□ -0.66
MALAT1-213ENST00000618227 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
MALAT1-213ENST00000618227 RPS10P46783 165 aaKnown RBP10.89□□□□□ -0.67
MALAT1-213ENST00000618227 SUMO2P61956 95 aaKnown RBP10.89□□□□□ -0.67
MALAT1-213ENST00000618227 LELP1Q5T871 98 aa10.89□□□□□ -0.67
MALAT1-213ENST00000618227 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
MALAT1-213ENST00000618227 SDHAF1A6NFY7 115 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 COLCA2A8K830 154 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 VCYO14598 125 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 GAS8-AS1O95177 125 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 TNFRSF6BO95407 300 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 NCR2O95944 276 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 TMEM70Q9BUB7 260 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 MRPL18Q9H0U6 180 aaKnown RBP10.88□□□□□ -0.67
MALAT1-213ENST00000618227 LINC00588Q9Y4M8 146 aa10.88□□□□□ -0.67
MALAT1-213ENST00000618227 SMKR1H3BMG3 65 aa10.87□□□□□ -0.67
MALAT1-213ENST00000618227 TCAPO15273 167 aa10.87□□□□□ -0.67
MALAT1-213ENST00000618227 LINC00476Q8WZB0 136 aa10.87□□□□□ -0.67
MALAT1-213ENST00000618227 TRAPPC1Q9Y5R8 145 aa10.87□□□□□ -0.67
MALAT1-213ENST00000618227 TRBV6-8A0A0A6YYG3 113 aa10.86□□□□□ -0.67
MALAT1-213ENST00000618227 TRAV8-6A0A0B4J262 113 aa10.86□□□□□ -0.67
MALAT1-213ENST00000618227 I3L3M4 83 aa10.86□□□□□ -0.67
MALAT1-213ENST00000618227 FABP9Q0Z7S8 132 aa10.86□□□□□ -0.67
MALAT1-213ENST00000618227 NPYP01303 97 aa10.85□□□□□ -0.67
MALAT1-213ENST00000618227 PMCHP20382 165 aa10.85□□□□□ -0.67
MALAT1-213ENST00000618227 COTL1Q14019 142 aa10.85□□□□□ -0.67
MALAT1-213ENST00000618227 IQCJQ1A5X6 159 aa10.85□□□□□ -0.67
MALAT1-213ENST00000618227 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
MALAT1-213ENST00000618227 TENM2Q9NT68 2774 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 K7EP13 123 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 SCO1O75880 301 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 RAB5AP20339 215 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 PKIAP61925 76 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 KIR2DL4Q99706 377 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 ALKBH7Q9BT30 221 aaPredicted RBP10.84□□□□□ -0.67
MALAT1-213ENST00000618227 STARD9Q9P2P6 4700 aa10.84□□□□□ -0.67
MALAT1-213ENST00000618227 TRBV25-1A0A075B6N4 114 aa10.83□□□□□ -0.68
MALAT1-213ENST00000618227 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
MALAT1-213ENST00000618227 K7EMI3 77 aa10.83□□□□□ -0.68
MALAT1-213ENST00000618227 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
MALAT1-213ENST00000618227 SMIM2Q9BVW6 85 aa10.83□□□□□ -0.68
MALAT1-213ENST00000618227 MAP1LC3AQ9H492 121 aa10.83□□□□□ -0.68
MALAT1-213ENST00000618227 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
MALAT1-213ENST00000618227 LCE6AA0A183 80 aa10.82□□□□□ -0.68
MALAT1-213ENST00000618227 KIAA1644Q3SXP7 199 aa10.82□□□□□ -0.68
MALAT1-213ENST00000618227 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms