RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271		Q6ZSV7	163 aa		5.55	□□□□□ -1.52
PCDH15-231	ENST00000617271	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.55	□□□□□ -1.52
PCDH15-231	ENST00000617271	LYPD6	Q86Y78	171 aa		5.55	□□□□□ -1.52
PCDH15-231	ENST00000617271	ASCC3	Q8N3C0	2202 aa	Known RBP	5.55	□□□□□ -1.52
PCDH15-231	ENST00000617271	ANKRD39	Q53RE8	183 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	PSMG3-AS1	Q96PY0	264 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	SPTSSB	Q8NFR3	76 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	ODF1	Q14990	250 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	IGKV1D-37	A0A075B6S9	117 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271		A0A1W2PNU3	283 aa	Predicted RBP	5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	NEXN-AS1	Q8NBZ9	246 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	MUC7	Q8TAX7	377 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	YLPM1	P49750	1951 aa	Known RBP	5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	EBI3	Q14213	229 aa		5.54	□□□□□ -1.52
PCDH15-231	ENST00000617271	TRBV6-8	A0A0A6YYG3	113 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	UBE2D3	P61077	147 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271		Q8N976	141 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	IGLV4-69	A0A075B6H9	119 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	NDUFA7	O95182	113 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	IGLV2-14	P01704	120 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	LINC00643	Q86TS7	51 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	CFAP126	Q5VTH2	177 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	C11orf71	Q6IPW1	123 aa		5.53	□□□□□ -1.52
PCDH15-231	ENST00000617271	MDC1	Q14676	2089 aa	Known RBP	5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271		M0R378	163 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	LELP1	Q5T871	98 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	LINC00467	Q9BRT7	94 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	TP53TG3	Q9ULZ0	132 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	TRAV23DV6	A0A075B6W5	121 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	FOXI1	Q12951	378 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	ZNF702P	Q9H963	129 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	TMEM223	A0PJW6	202 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	ANAPC1	Q9H1A4	1944 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	FER1L5	A0AVI2	2057 aa		5.52	□□□□□ -1.53
PCDH15-231	ENST00000617271	FXYD2	P54710	66 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	SPATA12	Q7Z6I5	190 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	TCL1B	O95988	128 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	ATP5E	P56381	51 aa	Predicted RBP	5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	LINC00173	Q6ZV60	143 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271		V9GYY9	64 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	LY6G6C	O95867	125 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	IGLC6	P0CF74	106 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	PRB2	P02812	416 aa	Predicted RBP	5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	IGKV2D-26	A0A0A0MRZ7	120 aa		5.51	□□□□□ -1.53
PCDH15-231	ENST00000617271	LY6L	H3BQJ8	138 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	PLA2G2A	P14555	144 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	COL4A4	P53420	1690 aa	Predicted RBP	5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271		E7EUB6	86 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	CD164L2	Q6UWJ8	174 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	MRPL55	Q7Z7F7	128 aa	Known RBP	5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	TIMM17B	O60830	172 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	COX17	Q14061	63 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	C20orf173	Q96LM9	149 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	MYO7B	Q6PIF6	2116 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	TNRC6B	Q9UPQ9	1833 aa	Known RBP	5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	DEFB1	P60022	68 aa		5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271	TNRC6A	Q8NDV7	1962 aa	Known RBP	5.5	□□□□□ -1.53
PCDH15-231	ENST00000617271		P0C879	139 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	PYGO1	Q9Y3Y4	419 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	LTBP2	Q14767	1821 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	SPTB	P11277	2137 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	PLAC8L1	A1L4L8	177 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	MSMP	Q1L6U9	139 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	TDRG1	Q3Y452	100 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	MBD6	Q96DN6	1003 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	ARID1A	O14497	2285 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271		A0A1B0GXF2	115 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271		B5MCH6	92 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	UBE2D2	P62837	147 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	KPRP	Q5T749	579 aa	Predicted RBP	5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	LINC00482	Q8N8I6	264 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	DENND4A	Q7Z401	1863 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	SERP1	Q9Y6X1	66 aa		5.49	□□□□□ -1.53
PCDH15-231	ENST00000617271	IGLV4-3	A0A075B6K6	122 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	ZFAND3	Q9H8U3	227 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	CABIN1	Q9Y6J0	2220 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	MRGPRG-AS1	Q2M3A8	158 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	KNL1	Q8NG31	2342 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271		F8WDY8	70 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	ZNF80	P51504	273 aa	Predicted RBP	5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	LINC00308	Q8TCZ7	52 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	C11orf1	Q9H5F2	150 aa		5.48	□□□□□ -1.53
PCDH15-231	ENST00000617271	TRBV6-5	A0A0K0K1A5	114 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	ZNF22	P17026	224 aa	Predicted RBP	5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	RPL28	P46779	137 aa	Known RBP	5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	BBC3	Q96PG8	261 aa	Predicted RBP	5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	PIK3CD-AS1	Q5SR53	167 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271		M0QY20	66 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	MRPS36	P82909	103 aa	Known RBP	5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	C3orf22	Q8N5N4	141 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	LINC01006	Q8NI28	216 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	MPDZ	O75970	2070 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	WFDC10B	Q8IUB3	73 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	CHCHD7	Q9BUK0	85 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271	SVIP	Q8NHG7	77 aa		5.47	□□□□□ -1.53
PCDH15-231	ENST00000617271		A0A096LNI7	61 aa		5.46	□□□□□ -1.53
PCDH15-231	ENST00000617271	FSHB	P01225	129 aa		5.46	□□□□□ -1.53

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