RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 UBE2E1P51965 193 aa8.72□□□□□ -1.01
TP53-222ENST00000617185 HIST1H4AP62805 103 aaKnown RBP8.72□□□□□ -1.01
TP53-222ENST00000617185 SDIM1Q6ZPB5 146 aa8.72□□□□□ -1.01
TP53-222ENST00000617185 EEF1AKMT3Q96AZ1 226 aa8.72□□□□□ -1.01
TP53-222ENST00000617185 PIMREGQ9BSJ6 248 aa8.72□□□□□ -1.01
TP53-222ENST00000617185 JPT2Q9H910 190 aa8.72□□□□□ -1.01
TP53-222ENST00000617185 K7EIM0 57 aa8.71□□□□□ -1.01
TP53-222ENST00000617185 TSHBP01222 138 aa8.71□□□□□ -1.01
TP53-222ENST00000617185 CLEC2BQ92478 149 aa8.71□□□□□ -1.01
TP53-222ENST00000617185 DSCR8Q96T75 97 aa8.71□□□□□ -1.01
TP53-222ENST00000617185 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.01
TP53-222ENST00000617185 ACACBO00763 2458 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 LEPROTO15243 131 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 MALP21145 153 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 DYNAPQ8N1N2 210 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 PRO0628Q9UI54 55 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 S4R3C0 116 aa8.71□□□□□ -1.02
TP53-222ENST00000617185 IGFL4Q6B9Z1 124 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
TP53-222ENST00000617185 AGPAT4-IT1Q9H0P7 198 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 KAAG1Q9UBP8 84 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 FAM19A4Q96LR4 140 aa8.7□□□□□ -1.02
TP53-222ENST00000617185 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 SPRY2O43597 315 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 C8orf31Q8N9H6 132 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 DCANP1Q8TF63 244 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 PEMTQ9UBM1 199 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 PYGO1Q9Y3Y4 419 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 CENPEQ02224 2701 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 IGHV1-3A0A0C4DH29 117 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 A0A0J9YX75 114 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 J3QLI3 93 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 M0R381 172 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 PPP1R17O96001 155 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 TP53TG1Q9Y2A0 90 aa8.69□□□□□ -1.02
TP53-222ENST00000617185 BUB1B-PAK6H3BSN5 160 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 C19orf84I3L1E1 186 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 IGLV1-47P01700 117 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 GNLYP22749 145 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 IGSF10Q6WRI0 2623 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 CACNA1AO00555 2505 aa8.68□□□□□ -1.02
TP53-222ENST00000617185 TRBV7-1A0A0A6YYK4 115 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
TP53-222ENST00000617185 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 TIMM17AQ99595 171 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 RHOHQ15669 191 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 I3L3M4 83 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 RNF152Q8N8N0 203 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 UPK3BQ9BT76 320 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 SMAD5-AS1Q9Y6J3 95 aa8.67□□□□□ -1.02
TP53-222ENST00000617185 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
TP53-222ENST00000617185 FBXL19-AS1Q494R0 122 aa8.66□□□□□ -1.02
TP53-222ENST00000617185 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
TP53-222ENST00000617185 PRSS2P07478 247 aa8.66□□□□□ -1.02
TP53-222ENST00000617185 MYO18BQ8IUG5 2567 aa8.65□□□□□ -1.02
TP53-222ENST00000617185 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.03
TP53-222ENST00000617185 ZFP36P26651 326 aaKnown RBP8.65□□□□□ -1.03
TP53-222ENST00000617185 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.03
TP53-222ENST00000617185 USP9XQ93008 2570 aaPredicted RBP8.65□□□□□ -1.03
TP53-222ENST00000617185 MGPP08493 103 aa8.64□□□□□ -1.03
TP53-222ENST00000617185 DAND5Q8N907 189 aa8.64□□□□□ -1.03
TP53-222ENST00000617185 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
TP53-222ENST00000617185 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
TP53-222ENST00000617185 POLQO75417 2590 aa8.63□□□□□ -1.03
TP53-222ENST00000617185 IGHV3OR16-10A0A075B7F0 116 aa8.63□□□□□ -1.03
TP53-222ENST00000617185 IGHV3-23P01764 117 aa8.63□□□□□ -1.03
TP53-222ENST00000617185 PFN2P35080 140 aa8.63□□□□□ -1.03
TP53-222ENST00000617185 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
TP53-222ENST00000617185 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
TP53-222ENST00000617185 NSUN5P1Q3KNT7 163 aa8.62□□□□□ -1.03
TP53-222ENST00000617185 LITAFQ99732 161 aa8.62□□□□□ -1.03
TP53-222ENST00000617185 FAM208BQ5VWN6 2430 aa8.62□□□□□ -1.03
TP53-222ENST00000617185 IGHV3OR16-8A0A075B7F1 116 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 VMO1Q7Z5L0 202 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 TMEM61Q8N0U2 210 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 RNF182Q8N6D2 247 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 C10orf105Q8TEF2 133 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
TP53-222ENST00000617185 Q6ZSV7 163 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 LINC00336Q6ZUF6 198 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
TP53-222ENST00000617185 ITLN2Q8WWU7 325 aaPredicted RBP8.61□□□□□ -1.03
TP53-222ENST00000617185 BPESC1Q9GZL8 116 aa8.61□□□□□ -1.03
TP53-222ENST00000617185 DAZ1Q9NQZ3 744 aaKnown RBP8.61□□□□□ -1.03
TP53-222ENST00000617185 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
TP53-222ENST00000617185 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
TP53-222ENST00000617185 INAFM2P0DMQ5 153 aa8.6□□□□□ -1.03
TP53-222ENST00000617185 PRORYQ9H606 182 aa8.6□□□□□ -1.03
TP53-222ENST00000617185 NDUFC2-KCTD14E9PQ53 114 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms