RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SPATA45Q537H7 98 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 ZNF705AQ6ZN79 300 aaPredicted RBP5.65□□□□□ -1.51
NEK3-207ENST00000617054 TRGV11A0A075B6L2 103 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 LCE2CQ5TA81 110 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 Q8N8P6 123 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 C11orf72Q8NBR9 251 aa5.65□□□□□ -1.51
NEK3-207ENST00000617054 ZMAT5Q9UDW3 170 aaKnown RBP5.65□□□□□ -1.51
NEK3-207ENST00000617054 DGAT2L7PQ6IED9 249 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 MORN3Q6PF18 240 aaPredicted RBP5.64□□□□□ -1.51
NEK3-207ENST00000617054 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 MRAP2Q96G30 205 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
NEK3-207ENST00000617054 HSPB8Q9UJY1 196 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 NUDT3O95989 172 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 NUTF2P61970 127 aaKnown RBP5.64□□□□□ -1.51
NEK3-207ENST00000617054 LAGE3Q14657 143 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 DKK2Q9UBU2 259 aa5.64□□□□□ -1.51
NEK3-207ENST00000617054 TRGV1A0A0A0MS02 117 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 RIPPLY3P57055 190 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 NOP10Q9NPE3 64 aaKnown RBP5.63□□□□□ -1.51
NEK3-207ENST00000617054 SDHAF1A6NFY7 115 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 M0QY20 66 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 FCER1GP30273 86 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 Q6ZTI0 123 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 IFI27L1Q96BM0 104 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 NBEAL1Q6ZS30 2694 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 M0R2P5 195 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 PRSS1P07477 247 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 RPL39P62891 51 aaKnown RBP5.63□□□□□ -1.51
NEK3-207ENST00000617054 ZC2HC1BQ5TFG8 222 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 POM121L12Q8N7R1 296 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 STPG4Q8N801 248 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 SNHG12Q9BXW3 62 aa5.63□□□□□ -1.51
NEK3-207ENST00000617054 ZNF415Q09FC8 603 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 CFAP126Q5VTH2 177 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 ST20Q9HBF5 79 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 DEFB4AO15263 64 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 PET117Q6UWS5 81 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 ZNF479Q96JC4 524 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 NDUFAF3Q9BU61 184 aa5.62□□□□□ -1.51
NEK3-207ENST00000617054 IGHV3-38A0A0C4DH36 116 aa5.61□□□□□ -1.51
NEK3-207ENST00000617054 CSNK1G2-AS1Q8NCQ2 148 aa5.61□□□□□ -1.51
NEK3-207ENST00000617054 KIR2DL5BA0A0G2JN68 375 aa5.61□□□□□ -1.51
NEK3-207ENST00000617054 KIR2DL5BA0A0G2JPC4 375 aa5.61□□□□□ -1.51
NEK3-207ENST00000617054 C9orf66Q5T8R8 295 aa5.61□□□□□ -1.51
NEK3-207ENST00000617054 KIR2DL5AQ8N109 375 aa5.61□□□□□ -1.51
NEK3-207ENST00000617054 PHLDA1Q8WV24 401 aaPredicted RBP5.61□□□□□ -1.51
NEK3-207ENST00000617054 OPRPNQ99935 248 aaPredicted RBP5.61□□□□□ -1.51
NEK3-207ENST00000617054 TRAV9-2A0A087WT02 112 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 GAGE12BA1L429 117 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 GAGE7O76087 117 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 GAGE12FP0CL80 117 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 GAGE12GP0CL81 117 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 GAGE12IP0CL82 117 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 POLR2KP53803 58 aaKnown RBP5.6□□□□□ -1.51
NEK3-207ENST00000617054 LINC01545Q5VT33 79 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 C20orf78Q9BR46 151 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 C2orf66Q6UXQ4 117 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 C3orf56Q8N813 242 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 GOLT1BQ9Y3E0 138 aa5.6□□□□□ -1.51
NEK3-207ENST00000617054 PLAC8L1A1L4L8 177 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 ZFP2Q6ZN57 461 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 SCGB3A1Q96QR1 104 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 DEFB135Q30KP9 77 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 UFSP1Q6NVU6 142 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 TP53TG1Q9Y2A0 90 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 MGAM2Q2M2H8 2515 aa5.59□□□□□ -1.51
NEK3-207ENST00000617054 C20orf202A1L168 122 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 IGLC3P0DOY3 106 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 DEFB130BP0DP73 79 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 DEFB130AP0DP74 79 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 BATFQ16520 125 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 CEMP1Q6PRD7 247 aaPredicted RBP5.59□□□□□ -1.52
NEK3-207ENST00000617054 OR4C5Q8NGB2 326 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 TMEM263Q8WUH6 116 aaKnown RBP5.59□□□□□ -1.52
NEK3-207ENST00000617054 KIR2DL4Q99706 377 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 TTTY13Q9BZ97 58 aa5.59□□□□□ -1.52
NEK3-207ENST00000617054 A8MWV9 139 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 VCYO14598 125 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 G0S2P27469 103 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 RRN3P1Q2M238 152 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 Q6ZN92 141 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 C20orf144Q9BQM9 153 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 C2orf88Q9BSF0 95 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
NEK3-207ENST00000617054 TENM3Q9P273 2699 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 TRGV2A0A075B6R0 118 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 CMC4P56277 68 aaPredicted RBP5.58□□□□□ -1.52
NEK3-207ENST00000617054 ORMDL2Q53FV1 153 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 MIEN1Q9BRT3 115 aa5.58□□□□□ -1.52
NEK3-207ENST00000617054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.57□□□□□ -1.52
NEK3-207ENST00000617054 INSL3P51460 131 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
NEK3-207ENST00000617054 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
NEK3-207ENST00000617054 TOMM6Q96B49 74 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms