RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TRBV7-3A0A075B6L6 115 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TRAV4A0A0B4J268 109 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 CRLF1O75462 422 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 PLNP26678 52 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 CFAP126Q5VTH2 177 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 Q6YL49 198 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 DCANP1Q8TF63 244 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TP53TG1Q9Y2A0 90 aa8.13□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SUMO2P61956 95 aaKnown RBP8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 PRR9Q5T870 116 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 RS1O15537 224 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 ELANEP08246 267 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 RHPN1-AS1Q9BWJ2 59 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 ID1P41134 155 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 LY6EQ16553 131 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 Q6ZSV7 163 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 POLQO75417 2590 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TEX49A0A1B0GTD5 131 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SLC25A20O43772 301 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 PPP1R17O96001 155 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 BAALCQ8WXS3 180 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 RASL10AQ92737 203 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 PF4V1P10720 104 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 DEFB112Q30KQ8 113 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 VPREB3Q9UKI3 123 aa8.11□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 ZNF688P0C7X2 276 aa8.1□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 COX6B1P14854 86 aa8.1□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 USP9XQ93008 2570 aaPredicted RBP8.1□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 A4D1N5 150 aa8.1□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 HERVK_113P61574 105 aa8.1□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TEN1Q86WV5 123 aa8.1□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 A8MTW9 85 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 IGHV4OR15-8A0A075B7B6 117 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 A0A087WW49 117 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TCTEX1D4Q5JR98 221 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 DAND5Q8N907 189 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 IGHV4-31P0DP07 118 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 ASIPP42127 132 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 GAGE5Q13069 117 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 GAGE6Q13070 117 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 SPXQ9BT56 116 aa8.09□□□□□ -1.11
SENP3-EIF4A1-201ENST00000614237 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 FAM159AQ6UWV7 190 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ZNF843Q8N446 348 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ZNF625Q96I27 306 aaPredicted RBP8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 IGHV4-59P01825 116 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TMEM95Q3KNT9 176 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 DUX3Q96PT4 197 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ZNF702PQ9H963 129 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 KIF25-AS1Q9Y6Z4 181 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 A8MZ25 164 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CFC1P0CG37 223 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ZNF56Q15929 161 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TMEM86BQ8N661 226 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 UTP20O75691 2785 aaKnown RBP8.08□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 C15orf53Q8NAA6 179 aa8.07□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 K7EQG2 157 aa8.07□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 LRRK2Q5S007 2527 aa8.07□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 RNF223E7ERA6 249 aa8.07□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 DEFB113Q30KQ7 82 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CEMP1Q6PRD7 247 aaPredicted RBP8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 EDA2RQ9HAV5 297 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 LINC00315P59091 139 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CD7P09564 240 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 MUSTN1Q8IVN3 82 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TOMM6Q96B49 74 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 FN1P02751 2386 aaKnown RBP8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TAL2Q16559 108 aa8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 NEXN-AS1Q8NBZ9 246 aa8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TRAV8-3A0A0A6YYJ7 113 aa8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 A0A0J9YX75 114 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 A0A0J9YY99 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 MRPL23Q16540 153 aaKnown RBP8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CR1P17927 2039 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms