RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 AGRNO00468 2067 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 ARHGEF17Q96PE2 2063 aaPredicted RBP3.97□□□□□ -1.77
CCL16-206ENST00000613642 MYO9BQ13459 2157 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 IGHV1-45A0A0A0MS14 117 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 C5orf67F2Z3F1 127 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 M0R3E3 92 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 SOCS3O14543 225 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 BAALC-AS2P0C853 105 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 RPL27AP46776 148 aaKnown RBP3.96□□□□□ -1.78
CCL16-206ENST00000613642 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
CCL16-206ENST00000613642 LINC00242Q5T6M2 205 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 Q6ZSV7 163 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 Q6ZTC4 211 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 Q8IYB0 196 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 ZNRF1Q8ND25 227 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 CCL28Q9NRJ3 127 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 TMEM14BQ9NUH8 114 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 EML5Q05BV3 1969 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 ATG2BQ96BY7 2078 aa3.96□□□□□ -1.78
CCL16-206ENST00000613642 TCF20Q9UGU0 1960 aaKnown RBP3.95□□□□□ -1.78
CCL16-206ENST00000613642 TRBV6-6A0A0A6YYG2 114 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 H7C2G1 150 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 I3L3M4 83 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 IGKV1-39P01597 117 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 IGLV3-25P01717 112 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 IGKV1D-39P04432 117 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 ARMS2P0C7Q2 107 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 P0C879 139 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 DEFA4P12838 97 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 LINC01560Q8TB33 94 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 CDH23Q9H251 3354 aa3.95□□□□□ -1.78
CCL16-206ENST00000613642 COL5A1P20908 1838 aaPredicted RBP3.95□□□□□ -1.78
CCL16-206ENST00000613642 IGLV3-16A0A075B6K0 115 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 A0A0J9YXY3 114 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 C15orf32Q32M92 178 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 Q5VV11 94 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 MUSTN1Q8IVN3 82 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 ZNF843Q8N446 348 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 XAGE1AQ9HD64 81 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 TMEM14CQ9P0S9 112 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 DNAH12Q6ZR08 3092 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 DYSFO75923 2080 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 DOCK7Q96N67 2140 aa3.94□□□□□ -1.78
CCL16-206ENST00000613642 IGLV3-9A0A075B6K5 115 aa3.93□□□□□ -1.78
CCL16-206ENST00000613642 TRBV6-8A0A0A6YYG3 113 aa3.93□□□□□ -1.78
CCL16-206ENST00000613642 IGIPA6NJ69 53 aa3.93□□□□□ -1.78
CCL16-206ENST00000613642 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
CCL16-206ENST00000613642 LEPROTO15243 131 aa3.93□□□□□ -1.78
CCL16-206ENST00000613642 PROP1O75360 226 aa3.93□□□□□ -1.78
CCL16-206ENST00000613642 KLF14Q8TD94 323 aaPredicted RBP3.93□□□□□ -1.78
CCL16-206ENST00000613642 MDC1Q14676 2089 aaKnown RBP3.92□□□□□ -1.78
CCL16-206ENST00000613642 IGLV2-18A0A075B6J9 118 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 IGHV5-10-1A0A0J9YXX1 117 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 TRGV3P03979 118 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 ZNF32P17041 273 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 ADAMTSL4-AS1Q5T5F5 129 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 ZNF833PQ6ZTB9 187 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 C9orf106Q8NAJ2 232 aa3.92□□□□□ -1.78
CCL16-206ENST00000613642 TANC2Q9HCD6 1990 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 IGLV3-12A0A075B6K2 115 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 M0R1W7 72 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 PSCAO43653 123 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 IGLV3-1P01715 115 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 RPS27P42677 84 aaKnown RBP3.91□□□□□ -1.78
CCL16-206ENST00000613642 FXYD7P58549 80 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
CCL16-206ENST00000613642 BSPH1Q075Z2 132 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 Q86TA4 180 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 TMEM61Q8N0U2 210 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 RETNLBQ9BQ08 111 aa3.91□□□□□ -1.78
CCL16-206ENST00000613642 IGHV3-16A0A0C4DH30 117 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 NREPQ16612 68 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 LY6G5CQ5SRR4 150 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 ENHOQ6UWT2 76 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 AMELXQ99217 191 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 CNFNQ9BYD5 112 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 KIF25-AS1Q9Y6Z4 181 aa3.9□□□□□ -1.79
CCL16-206ENST00000613642 XIRP2A4UGR9 3374 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 IGKV1D-42A0A075B6H8 117 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 NTN3O00634 580 aaPredicted RBP3.89□□□□□ -1.79
CCL16-206ENST00000613642 LINC00271P0C7V0 271 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
CCL16-206ENST00000613642 PDE6HQ13956 83 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 CCL14Q16627 93 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 MIAQ16674 131 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 LINC00322Q6ZN03 302 aaPredicted RBP3.89□□□□□ -1.79
CCL16-206ENST00000613642 LINC00467Q9BRT7 94 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 LINC00574Q9H8X3 128 aa3.89□□□□□ -1.79
CCL16-206ENST00000613642 CDC42SE2Q9NRR3 84 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms