RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MIAQ16674 131 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 P0C879 139 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 UBE2AP49459 152 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 C14orf132Q9NPU4 83 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 NFE4Q86UQ8 179 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 PRO0255Q9UI72 69 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 CREBBPQ92793 2442 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 A0A1B0GXF2 115 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 TRBV12-3P01733 135 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 FSTL3O95633 263 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 SPRY4Q9C004 299 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 H7C423 109 aa13.3□□□□□ -0.28
HMGXB3-206ENST00000613459 TCL1BO95988 128 aa13.29□□□□□ -0.28
HMGXB3-206ENST00000613459 F8W735 103 aaPredicted RBP13.29□□□□□ -0.28
HMGXB3-206ENST00000613459 MIR7-3HGQ8N6C7 128 aa13.29□□□□□ -0.28
HMGXB3-206ENST00000613459 C14orf177Q52M58 125 aa13.28□□□□□ -0.28
HMGXB3-206ENST00000613459 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
HMGXB3-206ENST00000613459 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
HMGXB3-206ENST00000613459 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
HMGXB3-206ENST00000613459 Q6ZUT4 128 aa13.28□□□□□ -0.28
HMGXB3-206ENST00000613459 TNRC6AQ8NDV7 1962 aaKnown RBP13.28□□□□□ -0.28
HMGXB3-206ENST00000613459 GTF3C1Q12789 2109 aa13.27□□□□□ -0.28
HMGXB3-206ENST00000613459 SEM1Q6ZVN7 128 aa13.27□□□□□ -0.28
HMGXB3-206ENST00000613459 DENND4CQ5VZ89 1909 aa13.27□□□□□ -0.29
HMGXB3-206ENST00000613459 NCKAP5O14513 1909 aa13.27□□□□□ -0.29
HMGXB3-206ENST00000613459 ZFP36P26651 326 aaKnown RBP13.27□□□□□ -0.29
HMGXB3-206ENST00000613459 TNFRSF13BO14836 293 aaPredicted RBP13.27□□□□□ -0.29
HMGXB3-206ENST00000613459 COX7BP24311 80 aa13.27□□□□□ -0.29
HMGXB3-206ENST00000613459 IL17DQ8TAD2 202 aa13.26□□□□□ -0.29
HMGXB3-206ENST00000613459 UFSP1Q6NVU6 142 aa13.26□□□□□ -0.29
HMGXB3-206ENST00000613459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.26□□□□□ -0.299e-7■■■■■ 30.1
HMGXB3-206ENST00000613459 ODF3BA8MYP8 253 aa13.26□□□□□ -0.29
HMGXB3-206ENST00000613459 NOTCH3Q9UM47 2321 aa13.26□□□□□ -0.29
HMGXB3-206ENST00000613459 NDUFV3P56181 108 aaKnown RBP13.26□□□□□ -0.29
HMGXB3-206ENST00000613459 UPK3BQ9BT76 320 aa13.26□□□□□ -0.29
HMGXB3-206ENST00000613459 PRB2P02812 416 aaPredicted RBP13.25□□□□□ -0.29
HMGXB3-206ENST00000613459 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
HMGXB3-206ENST00000613459 BRK1Q8WUW1 75 aa13.25□□□□□ -0.29
HMGXB3-206ENST00000613459 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
HMGXB3-206ENST00000613459 UQCRQO14949 82 aa13.24□□□□□ -0.29
HMGXB3-206ENST00000613459 ATP5EP2Q5VTU8 51 aa13.24□□□□□ -0.29
HMGXB3-206ENST00000613459 LRRC75A-AS1Q8N1F1 130 aa13.24□□□□□ -0.29
HMGXB3-206ENST00000613459 LOXL1Q08397 574 aaPredicted RBP13.24□□□□□ -0.29
HMGXB3-206ENST00000613459 C4orf48Q5BLP8 95 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 PTH2Q96A98 100 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 MAP6D1Q9H9H5 199 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 SMAD5-AS1Q9Y6J3 95 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 SEC61GP60059 68 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 HIST2H2BDQ6DRA6 164 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 IGLC6P0CF74 106 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 RNF183Q96D59 192 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 PLXNB3Q9ULL4 1909 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 B9D2Q9BPU9 175 aa13.23□□□□□ -0.29
HMGXB3-206ENST00000613459 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
HMGXB3-206ENST00000613459 A0A0J9YXY3 114 aa13.22□□□□□ -0.29
HMGXB3-206ENST00000613459 E7EUB6 86 aa13.22□□□□□ -0.29
HMGXB3-206ENST00000613459 TP73-AS1Q9UF72 201 aa13.21□□□□□ -0.29
HMGXB3-206ENST00000613459 KLK12Q9UKR0 248 aa13.21□□□□□ -0.29
HMGXB3-206ENST00000613459 IGF1P05019 195 aa13.21□□□□□ -0.3
HMGXB3-206ENST00000613459 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.3
HMGXB3-206ENST00000613459 LYRM9A8MSI8 78 aa13.2□□□□□ -0.3
HMGXB3-206ENST00000613459 SPANXB1Q9NS25 103 aaPredicted RBP13.2□□□□□ -0.3
HMGXB3-206ENST00000613459 UNQ9165/PRO28630Q6UXU0 137 aa13.2□□□□□ -0.3
HMGXB3-206ENST00000613459 CCDC140Q96MF4 163 aa13.2□□□□□ -0.3
HMGXB3-206ENST00000613459 ZFAND2AQ8N6M9 145 aa13.19□□□□□ -0.3
HMGXB3-206ENST00000613459 IGLV2-8P01709 118 aa13.19□□□□□ -0.3
HMGXB3-206ENST00000613459 DEFB135Q30KP9 77 aa13.19□□□□□ -0.3
HMGXB3-206ENST00000613459 FAM236DA0A1B0GTK5 79 aa13.19□□□□□ -0.3
HMGXB3-206ENST00000613459 FAM236CP0DP71 79 aa13.19□□□□□ -0.3
HMGXB3-206ENST00000613459 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
HMGXB3-206ENST00000613459 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 MLST8Q9BVC4 326 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 C3orf22Q8N5N4 141 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 MT-ATP8P03928 68 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 NEXN-AS1Q8NBZ9 246 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 TRAV23DV6A0A075B6W5 121 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 BPY2O14599 106 aa13.18□□□□□ -0.3
HMGXB3-206ENST00000613459 PLA2G5P39877 138 aa13.17□□□□□ -0.3
HMGXB3-206ENST00000613459 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
HMGXB3-206ENST00000613459 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 H0Y9J4 135 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 P0DMU3 169 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 FAM231AP0DMU4 169 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 FAM231CP0DMU5 169 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
HMGXB3-206ENST00000613459 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
HMGXB3-206ENST00000613459 MED13Q9UHV7 2174 aa13.15□□□□□ -0.3
HMGXB3-206ENST00000613459 K7EQG2 157 aa13.15□□□□□ -0.3
HMGXB3-206ENST00000613459 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
HMGXB3-206ENST00000613459 MSMPQ1L6U9 139 aa13.15□□□□□ -0.31
HMGXB3-206ENST00000613459 MBD6Q96DN6 1003 aa13.15□□□□□ -0.31
HMGXB3-206ENST00000613459 TMEM223A0PJW6 202 aa13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 NDUFC2-KCTD14E9PQ53 114 aa13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 ZNF80P51504 273 aaPredicted RBP13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 IBA57-AS1B1ANH7 110 aa13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
HMGXB3-206ENST00000613459 TEX49A0A1B0GTD5 131 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms