RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ZNF462Q96JM2 2506 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 CTRLP40313 264 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 TTTY13Q9BZ97 58 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 A4D1N5 150 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 K7EMT4 169 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 LINC01545Q5VT33 79 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 LRRC75A-AS1Q8N1F1 130 aa9.6□□□□□ -0.87
TNFAIP3-206ENST00000612899 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 ZFP2Q6ZN57 461 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 Q6ZQT7 251 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 Q9H8V8 135 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 FAM236AA0A1B0GUQ0 79 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 FAM236BA0A1B0GV22 79 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 SMIM9A6NGZ8 99 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 TMEM61Q8N0U2 210 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
TNFAIP3-206ENST00000612899 F8WEM9 126 aa9.58□□□□□ -0.88
TNFAIP3-206ENST00000612899 UQCRQO14949 82 aa9.58□□□□□ -0.88
TNFAIP3-206ENST00000612899 COL4A4P53420 1690 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-206ENST00000612899 FASNP49327 2511 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 C19orf71A6NCJ1 209 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 RBM3P98179 157 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 LINC00322Q6ZN03 302 aaPredicted RBP9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 LRRK2Q5S007 2527 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 CCDC140Q96MF4 163 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 A6NDX4 124 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 SPATA12Q7Z6I5 190 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 ODF3BA8MYP8 253 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
TNFAIP3-206ENST00000612899 HCFC1P51610 2035 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 MTORP42345 2549 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 GYPEP15421 78 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 SOCS3O14543 225 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 ODF1Q14990 250 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 RBMY1FQ15415 496 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 C10orf142B7Z368 130 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 ZNF80P51504 273 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 MDFICQ9P1T7 246 aa9.56□□□□□ -0.88
TNFAIP3-206ENST00000612899 EIF4EBP1Q13541 118 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 RNF152Q8N8N0 203 aa9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 IGLV10-54A0A075B6I4 117 aa9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 CFC1P0CG37 223 aa9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 TNRC6AQ8NDV7 1962 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-206ENST00000612899 CARD19Q96LW7 228 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 TNFRSF13BO14836 293 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 MRPL55Q7Z7F7 128 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 Q9HAA7 133 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 CEP192Q8TEP8 1941 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 TRAV13-2A0A0B4J235 113 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 A0A0J9YX75 114 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 FXYD2P54710 66 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
TNFAIP3-206ENST00000612899 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
TNFAIP3-206ENST00000612899 K7EQD1 137 aa9.53□□□□□ -0.88
TNFAIP3-206ENST00000612899 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 C20orf173Q96LM9 149 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 PRORYQ9H606 182 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 TMEM89A2RUT3 159 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 DEFB4AO15263 64 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 CRLF1O75462 422 aa9.52□□□□□ -0.89
TNFAIP3-206ENST00000612899 TRAV25A0A0B4J276 109 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 LOXL1Q08397 574 aaPredicted RBP9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 HAMPP81172 84 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 DEFB135Q30KP9 77 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
TNFAIP3-206ENST00000612899 NDUFA7O95182 113 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 A0A1B0GXF2 115 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 DAZ2Q13117 558 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 BAALCQ8WXS3 180 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 PRRC2CQ9Y520 2896 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 A0A1B0GX51 115 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 MUC22E2RYF6 1773 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
TNFAIP3-206ENST00000612899 E9PLD3 99 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 GDF5OSQ5U4N7 250 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 DAND5Q8N907 189 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 C11orf86A6NJI1 115 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 CRYGBP07316 175 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 NUP210LQ5VU65 1888 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 CLPSL1A2RUU4 121 aa9.49□□□□□ -0.89
TNFAIP3-206ENST00000612899 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms