RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SSNA1O43805 119 aa10.8□□□□□ -0.68
CSNK1E-215ENST00000612795 P01737 135 aa10.8□□□□□ -0.68
CSNK1E-215ENST00000612795 SLPIP03973 132 aa10.8□□□□□ -0.68
CSNK1E-215ENST00000612795 UBE2G2P60604 165 aa10.8□□□□□ -0.68
CSNK1E-215ENST00000612795 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
CSNK1E-215ENST00000612795 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
CSNK1E-215ENST00000612795 IGKV2-24A0A0C4DH68 120 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 RAB5CP51148 216 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 UBE2G1P62253 170 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 COX6A2Q02221 97 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 HIST1H2BAQ96A08 127 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 VAX2Q9UIW0 290 aa10.79□□□□□ -0.68
CSNK1E-215ENST00000612795 A6NHS1 94 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 INMT-MINDY4F8WBC2 141 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 ATP6V0CP27449 155 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 ZNF674Q2M3X9 581 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 COX8CQ7Z4L0 72 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 OR10AG1Q8NH19 301 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 LYPD6BQ8NI32 183 aa10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 ZNF471Q9BX82 626 aaPredicted RBP10.78□□□□□ -0.68
CSNK1E-215ENST00000612795 IGHV1-24A0A0C4DH33 117 aa10.77□□□□□ -0.69
CSNK1E-215ENST00000612795 GZMBP10144 247 aa10.77□□□□□ -0.69
CSNK1E-215ENST00000612795 SERF2P84101 59 aa10.77□□□□□ -0.69
CSNK1E-215ENST00000612795 IQCJQ1A5X6 159 aa10.77□□□□□ -0.69
CSNK1E-215ENST00000612795 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.69
CSNK1E-215ENST00000612795 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
CSNK1E-215ENST00000612795 NDUFS6O75380 124 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-215ENST00000612795 STPG4Q8N801 248 aa10.76□□□□□ -0.69
CSNK1E-215ENST00000612795 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
CSNK1E-215ENST00000612795 NKX6-2Q9C056 277 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-215ENST00000612795 TNFSF18Q9UNG2 199 aa10.76□□□□□ -0.69
CSNK1E-215ENST00000612795 LPAP08519 4548 aa10.76□□□□□ -0.69
CSNK1E-215ENST00000612795 MUC21A0A0G2JKD1 596 aa10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 FAM74A7A6NL05 159 aa10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 SMIM17P0DL12 118 aa10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 RPS10P46783 165 aaKnown RBP10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 DEFA3P59666 94 aa10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 SPANXN1Q5VSR9 72 aa10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 PRSS3P2Q8NHM4 247 aa10.74□□□□□ -0.69
CSNK1E-215ENST00000612795 MUC21A0A140T8X8 626 aa10.73□□□□□ -0.69
CSNK1E-215ENST00000612795 CFAP161Q6P656 301 aa10.73□□□□□ -0.69
CSNK1E-215ENST00000612795 IGLV4-60A0A075B6I1 120 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 CTXND1A0A1B0GTU2 59 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 LTAP01374 205 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 SULT1A2P50226 295 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 SSTP61278 116 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 C15orf56Q8N910 161 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 AQP10Q96PS8 301 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
CSNK1E-215ENST00000612795 A0A1B0GUV1 79 aa10.71□□□□□ -0.69
CSNK1E-215ENST00000612795 ZNF726P1Q15940 193 aa10.71□□□□□ -0.69
CSNK1E-215ENST00000612795 HIGD2BQ4VC39 106 aa10.71□□□□□ -0.69
CSNK1E-215ENST00000612795 AP1S3Q96PC3 154 aa10.71□□□□□ -0.69
CSNK1E-215ENST00000612795 SNAI2O43623 268 aa10.7□□□□□ -0.7
CSNK1E-215ENST00000612795 CXCL1P09341 107 aa10.7□□□□□ -0.7
CSNK1E-215ENST00000612795 AKR1C3P42330 323 aa10.7□□□□□ -0.7
CSNK1E-215ENST00000612795 A0A096LNI7 61 aa10.69□□□□□ -0.7
CSNK1E-215ENST00000612795 GAGE12HA6NDE8 117 aa10.69□□□□□ -0.7
CSNK1E-215ENST00000612795 UBE2L6O14933 153 aa10.69□□□□□ -0.7
CSNK1E-215ENST00000612795 MGPP08493 103 aa10.69□□□□□ -0.7
CSNK1E-215ENST00000612795 S100ZQ8WXG8 99 aa10.69□□□□□ -0.7
CSNK1E-215ENST00000612795 MARVELD1Q9BSK0 173 aa10.69□□□□□ -0.7
CSNK1E-215ENST00000612795 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
CSNK1E-215ENST00000612795 H7C1H1 209 aa10.68□□□□□ -0.7
CSNK1E-215ENST00000612795 UPK1BO75841 260 aa10.68□□□□□ -0.7
CSNK1E-215ENST00000612795 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
CSNK1E-215ENST00000612795 Q6ZRP5 223 aa10.68□□□□□ -0.7
CSNK1E-215ENST00000612795 STOML3Q8TAV4 291 aa10.68□□□□□ -0.7
CSNK1E-215ENST00000612795 CST9LP1Q5W188 147 aa10.67□□□□□ -0.7
CSNK1E-215ENST00000612795 TCEAL7Q9BRU2 100 aa10.67□□□□□ -0.7
CSNK1E-215ENST00000612795 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
CSNK1E-215ENST00000612795 KRTAP9-2Q9BYQ4 174 aa10.67□□□□□ -0.7
CSNK1E-215ENST00000612795 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
CSNK1E-215ENST00000612795 PKIGQ9Y2B9 76 aa10.67□□□□□ -0.7
CSNK1E-215ENST00000612795 NKX2-5P52952 324 aaPredicted RBP10.66□□□□□ -0.7
CSNK1E-215ENST00000612795 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.7
CSNK1E-215ENST00000612795 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
CSNK1E-215ENST00000612795 M0QY20 66 aa10.65□□□□□ -0.7
CSNK1E-215ENST00000612795 INO80EQ8NBZ0 244 aaPredicted RBP10.65□□□□□ -0.7
CSNK1E-215ENST00000612795 GVQW2A0A096LPI5 108 aaPredicted RBP10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 MAP1LC3B2A6NCE7 125 aa10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 AKR1C8PQ5T2L2 129 aa10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 RPL7L1Q6DKI1 246 aaKnown RBP10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 SUMO4Q6EEV6 95 aa10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 LINC00299Q6ZSB3 139 aa10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
CSNK1E-215ENST00000612795 BORCS7-ASMTA0A0B4J1R7 106 aa10.63□□□□□ -0.71
CSNK1E-215ENST00000612795 AMTP48728 403 aa10.63□□□□□ -0.71
CSNK1E-215ENST00000612795 FHITP49789 147 aa10.63□□□□□ -0.71
CSNK1E-215ENST00000612795 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
CSNK1E-215ENST00000612795 NDUFA13Q9P0J0 144 aa10.63□□□□□ -0.71
CSNK1E-215ENST00000612795 IFITM3Q01628 133 aa10.62□□□□□ -0.71
CSNK1E-215ENST00000612795 CHCHD10Q8WYQ3 142 aaPredicted RBP10.62□□□□□ -0.71
CSNK1E-215ENST00000612795 COTL1Q14019 142 aa10.61□□□□□ -0.71
CSNK1E-215ENST00000612795 RASL11AQ6T310 242 aa10.61□□□□□ -0.71
CSNK1E-215ENST00000612795 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
CSNK1E-215ENST00000612795 A0A0U1RQV1 116 aa10.6□□□□□ -0.71
CSNK1E-215ENST00000612795 S100A9P06702 114 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms