RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 TRAV12-2A0A075B6T6 113 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 A0A0B4J2C4 111 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 PF4V1P10720 104 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 ZNF22P17026 224 aaPredicted RBP8.9□□□□□ -0.98
TPM3-223ENST00000611659 EDN2P20800 178 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 RPL32P62910 135 aaKnown RBP8.9□□□□□ -0.98
TPM3-223ENST00000611659 POM121L12Q8N7R1 296 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 C15orf53Q8NAA6 179 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.9□□□□□ -0.98
TPM3-223ENST00000611659 TRIAP1O43715 76 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 NXPH4O95158 308 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 LY6EQ16553 131 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 MDFICQ9P1T7 246 aa8.9□□□□□ -0.98
TPM3-223ENST00000611659 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 GAGE7O76087 117 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 GAGE12FP0CL80 117 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 GAGE12GP0CL81 117 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 GAGE12IP0CL82 117 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 P0DMU3 169 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 FAM231AP0DMU4 169 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 FAM231CP0DMU5 169 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 GAGE4Q13068 117 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 H3BMM0 161 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 MOB4Q9Y3A3 225 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 A0A0J9YXY3 114 aa8.89□□□□□ -0.99
TPM3-223ENST00000611659 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
TPM3-223ENST00000611659 TRAV8-3A0A0A6YYJ7 113 aa8.88□□□□□ -0.99
TPM3-223ENST00000611659 M0R2P5 195 aa8.88□□□□□ -0.99
TPM3-223ENST00000611659 Q6ZSV7 163 aa8.88□□□□□ -0.99
TPM3-223ENST00000611659 APRG1Q8IVJ8 170 aa8.88□□□□□ -0.99
TPM3-223ENST00000611659 BPESC1Q9GZL8 116 aa8.88□□□□□ -0.99
TPM3-223ENST00000611659 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 KLLNB2CW77 178 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 M0QY20 66 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 LGALS9O00182 355 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 ODF3Q96PU9 254 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 K7ENP7 123 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 IGHV3-30-3P0DP02 117 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 IGHV1-69P01742 117 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 HTN1P15515 57 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 FBXL19-AS1Q494R0 122 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
TPM3-223ENST00000611659 TIMM21Q9BVV7 248 aa8.87□□□□□ -0.99
TPM3-223ENST00000611659 IGHV3-73A0A0B4J1V6 119 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 VPS13CQ709C8 3753 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 IGLV4-3A0A075B6K6 122 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 TRBV6-5A0A0K0K1A5 114 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 A0A1W2PPR1 153 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 M0QXV9 152 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 CD28P10747 220 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 NSUN5P1Q3KNT7 163 aa8.86□□□□□ -0.99
TPM3-223ENST00000611659 A8MZ25 164 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 RHOHQ15669 191 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 DUX3Q96PT4 197 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 DAZ1Q9NQZ3 744 aaKnown RBP8.85□□□□□ -0.99
TPM3-223ENST00000611659 ICOSQ9Y6W8 199 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 ID1P41134 155 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 ADORA2A-AS1P86434 159 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 SMIM20Q8N5G0 67 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 TRBV30A0A0K0K1B3 111 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 I3L3M4 83 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 ADAMTSL4-AS1Q5T5F5 129 aa8.85□□□□□ -0.99
TPM3-223ENST00000611659 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
TPM3-223ENST00000611659 H7C423 109 aa8.84□□□□□ -0.99
TPM3-223ENST00000611659 COX6CP09669 75 aa8.84□□□□□ -0.99
TPM3-223ENST00000611659 HIVEP3Q5T1R4 2406 aa8.84□□□□□ -0.99
TPM3-223ENST00000611659 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
TPM3-223ENST00000611659 SPINK13Q1W4C9 94 aa8.84□□□□□ -0.99
TPM3-223ENST00000611659 C19orf54Q5BKX5 351 aa8.84□□□□□ -0.99
TPM3-223ENST00000611659 SORL1Q92673 2214 aa8.84□□□□□ -1
TPM3-223ENST00000611659 NDUFA12Q9UI09 145 aa8.83□□□□□ -1
TPM3-223ENST00000611659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -18e-7■■■■□ 20.9
TPM3-223ENST00000611659 LMO4P61968 165 aa8.83□□□□□ -1
TPM3-223ENST00000611659 BLCAPP62952 87 aa8.83□□□□□ -1
TPM3-223ENST00000611659 C3orf56Q8N813 242 aa8.83□□□□□ -1
TPM3-223ENST00000611659 DAND5Q8N907 189 aa8.83□□□□□ -1
TPM3-223ENST00000611659 USMG5Q96IX5 58 aa8.83□□□□□ -1
TPM3-223ENST00000611659 C9orf85Q96MD7 179 aa8.82□□□□□ -1
TPM3-223ENST00000611659 PRRC2AP48634 2157 aaKnown RBP8.82□□□□□ -1
TPM3-223ENST00000611659 LITAFQ99732 161 aa8.82□□□□□ -1
TPM3-223ENST00000611659 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
TPM3-223ENST00000611659 DCANP1Q8TF63 244 aa8.81□□□□□ -1
TPM3-223ENST00000611659 A0A0J9YX75 114 aa8.81□□□□□ -1
TPM3-223ENST00000611659 H3BUX3 64 aa8.81□□□□□ -1
TPM3-223ENST00000611659 Q6Q795 121 aa8.81□□□□□ -1
TPM3-223ENST00000611659 CHCHD5Q9BSY4 110 aa8.81□□□□□ -1
TPM3-223ENST00000611659 IGHV1OR15-1A0A075B7D0 117 aa8.8□□□□□ -1
TPM3-223ENST00000611659 PROK1P58294 105 aa8.8□□□□□ -1
TPM3-223ENST00000611659 HERV-K104P63124 156 aa8.8□□□□□ -1
TPM3-223ENST00000611659 NBL1P41271 181 aa8.8□□□□□ -1
TPM3-223ENST00000611659 LY6DQ14210 128 aa8.8□□□□□ -1
TPM3-223ENST00000611659 IGHV1-58A0A0C4DH39 117 aa8.79□□□□□ -1
TPM3-223ENST00000611659 KNCNA6PVL3 124 aa8.79□□□□□ -1
TPM3-223ENST00000611659 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms