RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZNF415Q09FC8 603 aa7.67□□□□□ -1.18
PABPC1-224ENST00000610907 RAX2Q96IS3 184 aa7.67□□□□□ -1.18
PABPC1-224ENST00000610907 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
PABPC1-224ENST00000610907 PRADC1Q9BSG0 188 aa7.67□□□□□ -1.18
PABPC1-224ENST00000610907 SPXQ9BT56 116 aa7.67□□□□□ -1.18
PABPC1-224ENST00000610907 MAP6D1Q9H9H5 199 aa7.67□□□□□ -1.18
PABPC1-224ENST00000610907 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 RBMY1A1P0DJD3 496 aaKnown RBP7.66□□□□□ -1.18
PABPC1-224ENST00000610907 RBMY1CP0DJD4 496 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 CRYBA4P53673 196 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
PABPC1-224ENST00000610907 KHDC1LQ5JSQ8 128 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 C20orf203Q8NBC4 194 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 PHLDA1Q8WV24 401 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-224ENST00000610907 DUX3Q96PT4 197 aa7.66□□□□□ -1.18
PABPC1-224ENST00000610907 AGRNO00468 2067 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 RBMY1BA6NDE4 496 aaKnown RBP7.65□□□□□ -1.18
PABPC1-224ENST00000610907 RBMY1EA6NEQ0 496 aaKnown RBP7.65□□□□□ -1.18
PABPC1-224ENST00000610907 DNAJC9-AS1A6NH13 148 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 RHODO00212 210 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 RBMY1DP0C7P1 496 aaKnown RBP7.65□□□□□ -1.18
PABPC1-224ENST00000610907 RPL39P62891 51 aaKnown RBP7.65□□□□□ -1.18
PABPC1-224ENST00000610907 FHL3Q13643 280 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 NFE4Q86UQ8 179 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 RAB37Q96AX2 223 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.18
PABPC1-224ENST00000610907 A0A1B0GWB2 263 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 INSP01308 110 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 P0DMU3 169 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 FAM231AP0DMU4 169 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 FAM231CP0DMU5 169 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 CMC4P56277 68 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-224ENST00000610907 SCGB2A2Q13296 93 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 WFDC11Q8NEX6 87 aa7.64□□□□□ -1.19
PABPC1-224ENST00000610907 NHP2Q9NX24 153 aaKnown RBP7.64□□□□□ -1.19
PABPC1-224ENST00000610907 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 C12orf74Q32Q52 190 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 BEAN1Q3B7T3 259 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 CD300EQ496F6 205 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-224ENST00000610907 RNASE8Q8TDE3 154 aaKnown RBP7.63□□□□□ -1.19
PABPC1-224ENST00000610907 DNAJC30Q96LL9 226 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 C16orf95Q9H693 158 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 ZANQ9Y493 2812 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 A6NJY4 79 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 LINC01587Q99440 93 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 MXRA5Q9NR99 2828 aa7.63□□□□□ -1.19
PABPC1-224ENST00000610907 IGLL5B9A064 214 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 CCL24O00175 119 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 HTN1P15515 57 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 OCIAD2Q56VL3 154 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 SCGB1D4Q6XE38 83 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 C11orf72Q8NBR9 251 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 VCX2Q9H322 139 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 SORL1Q92673 2214 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 ABCA12Q86UK0 2595 aa7.62□□□□□ -1.19
PABPC1-224ENST00000610907 TEX15Q9BXT5 2789 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 CENPEQ02224 2701 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 K7ERU9 68 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 IGHV3-53P01767 116 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 RBX1P62877 108 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 TMEM170BQ5T4T1 132 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 CFAP126Q5VTH2 177 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 ZNRF2Q8NHG8 242 aa7.61□□□□□ -1.19
PABPC1-224ENST00000610907 SPANXB1Q9NS25 103 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-224ENST00000610907 TSSC4Q9Y5U2 329 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-224ENST00000610907 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
PABPC1-224ENST00000610907 RS1O15537 224 aa7.6□□□□□ -1.19
PABPC1-224ENST00000610907 RNASE1P07998 156 aaKnown RBP7.6□□□□□ -1.19
PABPC1-224ENST00000610907 ODF3L2Q3SX64 289 aa7.6□□□□□ -1.19
PABPC1-224ENST00000610907 STHQ8IWL8 128 aa7.6□□□□□ -1.19
PABPC1-224ENST00000610907 ESM1Q9NQ30 184 aa7.6□□□□□ -1.19
PABPC1-224ENST00000610907 SETXQ7Z333 2677 aaKnown RBP7.6□□□□□ -1.19
PABPC1-224ENST00000610907 CSMD2Q7Z408 3487 aa7.6□□□□□ -1.19
PABPC1-224ENST00000610907 A0A0J9YY99 117 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 TMEM223A0PJW6 202 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 J3QQQ9 107 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 K7ERJ3 54 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 LEPROTO15243 131 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 SRSF9Q13242 221 aaKnown RBP eCLIP7.59□□□□□ -1.19
PABPC1-224ENST00000610907 ZNF479Q96JC4 524 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 AMELXQ99217 191 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 NAA38Q9BRA0 125 aaKnown RBP7.59□□□□□ -1.19
PABPC1-224ENST00000610907 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
PABPC1-224ENST00000610907 CD28P10747 220 aa7.59□□□□□ -1.2
PABPC1-224ENST00000610907 LGALS3P17931 250 aaKnown RBP7.59□□□□□ -1.2
PABPC1-224ENST00000610907 EMP1P54849 157 aa7.59□□□□□ -1.2
PABPC1-224ENST00000610907 RRN3P1Q2M238 152 aa7.59□□□□□ -1.2
PABPC1-224ENST00000610907 SLC25A29Q8N8R3 303 aa7.59□□□□□ -1.2
PABPC1-224ENST00000610907 PLEKHB2Q96CS7 222 aa7.59□□□□□ -1.2
PABPC1-224ENST00000610907 FAM110AQ9BQ89 295 aa7.59□□□□□ -1.2
PABPC1-224ENST00000610907 MYO9AB2RTY4 2548 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 APCP25054 2843 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 IGHV3-73A0A0B4J1V6 119 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 UBE2D1P51668 147 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 KRTAP1-1Q07627 177 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 LINC01006Q8NI28 216 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms