RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GNLYP22749 145 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 NBL1P41271 181 aa15.22■□□□□ 0.03
SSBP3-216ENST00000610401 ATP6V0BQ99437 205 aa15.22■□□□□ 0.03
SSBP3-216ENST00000610401 A4D1N5 150 aa15.22■□□□□ 0.03
SSBP3-216ENST00000610401 J3QQQ9 107 aa15.22■□□□□ 0.03
SSBP3-216ENST00000610401 IGIPA6NJ69 53 aa15.22■□□□□ 0.03
SSBP3-216ENST00000610401 C1QTNF4Q9BXJ3 329 aa15.22■□□□□ 0.03
SSBP3-216ENST00000610401 PRRC2AP48634 2157 aaKnown RBP15.21■□□□□ 0.03
SSBP3-216ENST00000610401 C9JAW5 83 aa15.21■□□□□ 0.03
SSBP3-216ENST00000610401 ZNF876PQ49A33 203 aa15.21■□□□□ 0.03
SSBP3-216ENST00000610401 VCYO14598 125 aa15.21■□□□□ 0.03
SSBP3-216ENST00000610401 A0A0U1RRA0 63 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 AVPP01185 164 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 XGP55808 180 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 SYNJ2BPP57105 145 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 Q6ZSV7 163 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 CIDEAO60543 219 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 TRAV8-3A0A0A6YYJ7 113 aa15.2■□□□□ 0.02
SSBP3-216ENST00000610401 CARD19Q96LW7 228 aa15.19■□□□□ 0.02
SSBP3-216ENST00000610401 KIF25-AS1Q9Y6Z4 181 aa15.19■□□□□ 0.02
SSBP3-216ENST00000610401 IGHV4-30-2A0A087WSY4 118 aa15.19■□□□□ 0.02
SSBP3-216ENST00000610401 UBE2D1P51668 147 aa15.19■□□□□ 0.02
SSBP3-216ENST00000610401 DUX3Q96PT4 197 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 A0A1B0GV72 72 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 ELANEP08246 267 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 POLR2KP53803 58 aaKnown RBP15.18■□□□□ 0.02
SSBP3-216ENST00000610401 ATP5J2P56134 94 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 ANKRD29Q8N6D5 301 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 SPATA25Q9BR10 227 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 LENEPQ9Y5L5 61 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 TRAV26-1A0A087WT03 109 aa15.18■□□□□ 0.02
SSBP3-216ENST00000610401 IGHV3-38A0A0C4DH36 116 aa15.17■□□□□ 0.02
SSBP3-216ENST00000610401 IGHV3-30P01768 117 aa15.17■□□□□ 0.02
SSBP3-216ENST00000610401 IGHV3-30-5P0DP03 117 aa15.17■□□□□ 0.02
SSBP3-216ENST00000610401 MUSTN1Q8IVN3 82 aa15.17■□□□□ 0.02
SSBP3-216ENST00000610401 CDIP1Q9H305 208 aa15.17■□□□□ 0.02
SSBP3-216ENST00000610401 DAND5Q8N907 189 aa15.17■□□□□ 0.02
SSBP3-216ENST00000610401 IGHV4-59P01825 116 aa15.16■□□□□ 0.02
SSBP3-216ENST00000610401 DEFB136Q30KP8 78 aa15.16■□□□□ 0.02
SSBP3-216ENST00000610401 GEMIN7Q9H840 131 aaKnown RBP15.16■□□□□ 0.02
SSBP3-216ENST00000610401 PRO1854Q9UHT4 67 aa15.16■□□□□ 0.02
SSBP3-216ENST00000610401 A8MWV9 139 aa15.15■□□□□ 0.02
SSBP3-216ENST00000610401 PIEZO1Q92508 2521 aa15.15■□□□□ 0.02
SSBP3-216ENST00000610401 IGHV3-16A0A0C4DH30 117 aa15.14■□□□□ 0.01
SSBP3-216ENST00000610401 ID1P41134 155 aa15.14■□□□□ 0.01
SSBP3-216ENST00000610401 VCX2Q9H322 139 aa15.14■□□□□ 0.01
SSBP3-216ENST00000610401 C10orf126Q8N4M7 172 aa15.14■□□□□ 0.01
SSBP3-216ENST00000610401 DCANP1Q8TF63 244 aa15.14■□□□□ 0.01
SSBP3-216ENST00000610401 IGHG2P01859 326 aa15.13■□□□□ 0.01
SSBP3-216ENST00000610401 CCL19Q99731 98 aa15.13■□□□□ 0.01
SSBP3-216ENST00000610401 KHDC1LQ5JSQ8 128 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 SLC25A29Q8N8R3 303 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 MTORP42345 2549 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 FN1P02751 2386 aaKnown RBP15.12■□□□□ 0.01
SSBP3-216ENST00000610401 EIF4EBP3O60516 100 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-216ENST00000610401 C19orf54Q5BKX5 351 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 ZNF625Q96I27 306 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-216ENST00000610401 AKAP9Q99996 3911 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 KLLNB2CW77 178 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 M0QY20 66 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 PPP1R17O96001 155 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 Q6ZUT4 128 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 USMG5Q96IX5 58 aa15.12■□□□□ 0.01
SSBP3-216ENST00000610401 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
SSBP3-216ENST00000610401 GATA3P23771 443 aa15.11■□□□□ 0.01
SSBP3-216ENST00000610401 DOPEY1Q5JWR5 2465 aa15.11■□□□□ 0.01
SSBP3-216ENST00000610401 CD28P10747 220 aa15.11■□□□□ 0.01
SSBP3-216ENST00000610401 FAM19A4Q96LR4 140 aa15.11■□□□□ 0.01
SSBP3-216ENST00000610401 PIMREGQ9BSJ6 248 aa15.11■□□□□ 0.01
SSBP3-216ENST00000610401 UBE2D3P61077 147 aa15.1■□□□□ 0.01
SSBP3-216ENST00000610401 UBE2D2P62837 147 aa15.1■□□□□ 0.01
SSBP3-216ENST00000610401 IGHV3OR16-12A0A075B7B8 117 aa15.1■□□□□ 0.01
SSBP3-216ENST00000610401 SLC25A20O43772 301 aa15.1■□□□□ 0.01
SSBP3-216ENST00000610401 ERG28Q9UKR5 140 aa15.1■□□□□ 0.01
SSBP3-216ENST00000610401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.1■□□□□ 0.01
SSBP3-216ENST00000610401 IGKV2-29A2NJV5 120 aaPredicted RBP15.1■□□□□ 0.01
SSBP3-216ENST00000610401 TEN1Q86WV5 123 aa15.1■□□□□ 0.01
SSBP3-216ENST00000610401 ZNF462Q96JM2 2506 aa15.09■□□□□ 0.01
SSBP3-216ENST00000610401 NTN5Q8WTR8 489 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-216ENST00000610401 SNRPD3P62318 126 aaKnown RBP15.09■□□□□ 0.01
SSBP3-216ENST00000610401 PPDPFLQ8WWR9 84 aa15.08■□□□□ 0.01
SSBP3-216ENST00000610401 ZNF22P17026 224 aaPredicted RBP15.08■□□□□ 0
SSBP3-216ENST00000610401 C18orf65Q6ZTR6 163 aa15.08■□□□□ 0
SSBP3-216ENST00000610401 IGHV4OR15-8A0A075B7B6 117 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 IGHV1OR15-1A0A075B7D0 117 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 A0A087WW49 117 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 CRYBA4P53673 196 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 AMELXQ99217 191 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 TRBV20-1A0A075B6N2 111 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 TEX49A0A1B0GTD5 131 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 A6NDX4 124 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 DEFB112Q30KQ8 113 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 TMEM141Q96I45 108 aa15.07■□□□□ 0
SSBP3-216ENST00000610401 TRBV27A0A0K0K1C4 114 aa15.06■□□□□ 0
SSBP3-216ENST00000610401 PAPPA-AS1Q5QFB9 102 aa15.06■□□□□ 0
SSBP3-216ENST00000610401 RHODO00212 210 aa15.06■□□□□ 0
SSBP3-216ENST00000610401 RNF183Q96D59 192 aa15.06■□□□□ 0
SSBP3-216ENST00000610401 C11orf44Q8N8P7 122 aa15.06■□□□□ 0
SSBP3-216ENST00000610401 TIMM17AQ99595 171 aa15.06■□□□□ 0
SSBP3-216ENST00000610401 IGLV4-3A0A075B6K6 122 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms