RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 H7BZZ5 65 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 BAALC-AS2P0C853 105 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 NMSQ5H8A3 153 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 C9orf163Q8N9P6 203 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 MUCL1Q96DR8 90 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 ODF3Q96PU9 254 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 SMIM7Q9BQ49 75 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 MINOS1-NBL1R4GNA1 71 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 KCPQ6ZWJ8 1503 aa1.84□□□□□ -2.11
SMCHD1-213ENST00000609587 STRCP1A6NGW2 1772 aa1.84□□□□□ -2.12
SMCHD1-213ENST00000609587 RGPD2P0DJD1 1756 aa1.84□□□□□ -2.12
SMCHD1-213ENST00000609587 UNC13BO14795 1591 aa1.84□□□□□ -2.12
SMCHD1-213ENST00000609587 DIP2CQ9Y2E4 1556 aa1.84□□□□□ -2.12
SMCHD1-213ENST00000609587 TCHHQ07283 1943 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 C1orf167Q5SNV9 1468 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 LRRC9Q6ZRR7 1453 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 BTAF1O14981 1849 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 CXorf51AA0A1B0GTR3 108 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 C9orf116Q5BN46 136 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 SLC48A1Q6P1K1 146 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 C18orf32Q8TCD1 76 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 MGST2Q99735 147 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 LHFPL6Q9Y693 200 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 CASP8AP2Q9UKL3 1982 aa1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 SUPT6HQ7KZ85 1726 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-213ENST00000609587 FREM3P0C091 2139 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 IQSEC2Q5JU85 1478 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 FANCD2Q9BXW9 1451 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 PATJQ8NI35 1801 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 EFCAB5A4FU69 1503 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 ABCC1P33527 1531 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 RAPGEF6Q8TEU7 1601 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 TRBV7-1A0A0A6YYK4 115 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 TRAV13-2A0A0B4J235 113 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 LOC107984156A0A0G2JMH3 177 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 NDUFC1O43677 76 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 CXCL8P10145 99 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 FAUP35544 74 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 KRTDAPP60985 99 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 UBE2G1P62253 170 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 MIR22HGQ0VDD5 57 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 HMGN3Q15651 99 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 MPV17LQ2QL34 196 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 DEFB113Q30KQ7 82 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 ZNF791Q3KP31 576 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 SPANXN5Q5MJ07 72 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 CASC2Q6XLA1 102 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 Q6ZS52 159 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 ARL17AQ8IVW1 177 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 OR8B3Q8NGG8 313 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 FAM213BQ8TBF2 198 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 CYP4F30PQ9H0H9 118 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 CDC42SE1Q9NRR8 79 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 HIGD1BQ9P298 99 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 COL4A5P29400 1685 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 NWD2Q9ULI1 1742 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 TRPM7Q96QT4 1865 aa1.82□□□□□ -2.12
SMCHD1-213ENST00000609587 RGPD1P0DJD0 1748 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 ITSN1Q15811 1721 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 LAMB2P55268 1798 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 TRBV10-3A0A0K0K1G6 114 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 MUC21A0A140T8X8 626 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 NAP1L6A6NFF2 107 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 BCE1O60756 84 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 MGST1P10620 155 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 EFNA4P52798 201 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 UBE2D3P61077 147 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 UBE2D2P62837 147 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 GNGT1P63211 74 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 KLKP1Q107X0 134 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 ZNF833PQ6ZTB9 187 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 Q8TAT8 98 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 DOCK2Q92608 1830 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 TANC1Q9C0D5 1861 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 CUL9Q8IWT3 2517 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 EDC4Q6P2E9 1401 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 MED12LQ86YW9 2145 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 MED13Q9UHV7 2174 aa1.81□□□□□ -2.12
SMCHD1-213ENST00000609587 KDM6BO15054 1643 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 ARFGEF2Q9Y6D5 1785 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 MGAMO43451 1857 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 A0A087WWC5 75 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 TRAV12-1A0A0B4J245 112 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 PIGBOS1A0A0B4J2F0 54 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 HCG22E2RYF7 251 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 ASAH2BP0C7U1 165 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 SPATA45Q537H7 98 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 S100A7L2Q5SY68 101 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 CFAP126Q5VTH2 177 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 Q5VV11 94 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 VMO1Q7Z5L0 202 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 FAM167A-AS1Q96KT0 104 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 PSORS1C2Q9UIG4 136 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 C22orf24Q9Y442 160 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 DUOX2Q9NRD8 1548 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 TIAM1Q13009 1591 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 CLTCQ00610 1675 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 SCN11AQ9UI33 1791 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms