RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 C19orf71A6NCJ1 209 aa9.73□□□□□ -0.85
SSBP4-214ENST00000607020 CXCL1P09341 107 aa9.73□□□□□ -0.85
SSBP4-214ENST00000607020 ARMS2P0C7Q2 107 aa9.73□□□□□ -0.85
SSBP4-214ENST00000607020 LINC00694P0DN24 101 aa9.73□□□□□ -0.85
SSBP4-214ENST00000607020 BIN3Q9NQY0 253 aa9.73□□□□□ -0.85
SSBP4-214ENST00000607020 A0A087WWC5 75 aa9.72□□□□□ -0.85
SSBP4-214ENST00000607020 SRP19P09132 144 aaKnown RBP9.72□□□□□ -0.85
SSBP4-214ENST00000607020 PIK3CD-AS1Q5SR53 167 aa9.72□□□□□ -0.85
SSBP4-214ENST00000607020 IGHV3-73A0A0B4J1V6 119 aa9.71□□□□□ -0.86
SSBP4-214ENST00000607020 K7EN84 100 aa9.71□□□□□ -0.86
SSBP4-214ENST00000607020 RAB14P61106 215 aa9.71□□□□□ -0.86
SSBP4-214ENST00000607020 OCC1Q8TAD7 63 aa9.71□□□□□ -0.86
SSBP4-214ENST00000607020 SMIM7Q9BQ49 75 aa9.71□□□□□ -0.86
SSBP4-214ENST00000607020 P01737 135 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 ATRAIDQ6UW56 229 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 ZFP2Q6ZN57 461 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 Q6ZRU5 148 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 SMDT1Q9H4I9 107 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
SSBP4-214ENST00000607020 C9JQL5 133 aa9.69□□□□□ -0.86
SSBP4-214ENST00000607020 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
SSBP4-214ENST00000607020 SRSF3P84103 164 aaKnown RBP9.69□□□□□ -0.86
SSBP4-214ENST00000607020 IFITM2Q01629 132 aa9.69□□□□□ -0.86
SSBP4-214ENST00000607020 PEA15Q15121 130 aa9.69□□□□□ -0.86
SSBP4-214ENST00000607020 C14orf177Q52M58 125 aa9.69□□□□□ -0.86
SSBP4-214ENST00000607020 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
SSBP4-214ENST00000607020 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 A8MWV9 139 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 M0R381 172 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 SNAI2O43623 268 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 OR5AL1P0C617 328 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 GAGE1Q13065 139 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 GAGE4Q13068 117 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 GAGE5Q13069 117 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 GAGE13Q4V321 117 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 NIT1Q86X76 327 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 ZFP82Q8N141 532 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 NUDT10Q8NFP7 164 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 NUDT11Q96G61 164 aa9.68□□□□□ -0.86
SSBP4-214ENST00000607020 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
SSBP4-214ENST00000607020 XKRY2A2RUG3 117 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 GZMBP10144 247 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 CHCHD7Q9BUK0 85 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
SSBP4-214ENST00000607020 JPT2Q9H910 190 aa9.67□□□□□ -0.86
SSBP4-214ENST00000607020 IGLC6P0CF74 106 aa9.66□□□□□ -0.86
SSBP4-214ENST00000607020 ELOBQ15370 118 aa9.66□□□□□ -0.86
SSBP4-214ENST00000607020 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
SSBP4-214ENST00000607020 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
SSBP4-214ENST00000607020 RPP21Q9H633 154 aaKnown RBP9.66□□□□□ -0.86
SSBP4-214ENST00000607020 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
SSBP4-214ENST00000607020 URGCP-MRPS24S4R325 110 aa9.66□□□□□ -0.86
SSBP4-214ENST00000607020 Q0VG73 95 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 UBE2WQ96B02 151 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 SAMD10Q9BYL1 202 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 Q9UF83 564 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 TNXBP22105 4242 aa9.65□□□□□ -0.86
SSBP4-214ENST00000607020 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
SSBP4-214ENST00000607020 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
SSBP4-214ENST00000607020 RHODO00212 210 aa9.64□□□□□ -0.87
SSBP4-214ENST00000607020 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
SSBP4-214ENST00000607020 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
SSBP4-214ENST00000607020 GATCO43716 136 aaKnown RBP9.63□□□□□ -0.87
SSBP4-214ENST00000607020 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
SSBP4-214ENST00000607020 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
SSBP4-214ENST00000607020 NAT8Q9UHE5 227 aa9.63□□□□□ -0.87
SSBP4-214ENST00000607020 A0A087WWL8 130 aa9.62□□□□□ -0.87
SSBP4-214ENST00000607020 F2Z2F3 143 aa9.62□□□□□ -0.87
SSBP4-214ENST00000607020 CTRLP40313 264 aa9.62□□□□□ -0.87
SSBP4-214ENST00000607020 CT83Q5H943 113 aa9.62□□□□□ -0.87
SSBP4-214ENST00000607020 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
SSBP4-214ENST00000607020 A0A087WX48 190 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 SSTP61278 116 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 RPL23P62829 140 aaKnown RBP9.61□□□□□ -0.87
SSBP4-214ENST00000607020 CACNG7P62955 275 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 ADIRFQ15847 76 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 LYZL1Q6UWQ5 148 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 AP1S3Q96PC3 154 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 OSTCQ9NRP0 149 aa9.61□□□□□ -0.87
SSBP4-214ENST00000607020 A8MWL6 223 aa9.6□□□□□ -0.87
SSBP4-214ENST00000607020 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
SSBP4-214ENST00000607020 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-214ENST00000607020 GTSF1Q8WW33 167 aa9.6□□□□□ -0.87
SSBP4-214ENST00000607020 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
SSBP4-214ENST00000607020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-214ENST00000607020 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
SSBP4-214ENST00000607020 C15orf54Q8N8G6 183 aa9.59□□□□□ -0.87
SSBP4-214ENST00000607020 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms