RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 TMEM95Q3KNT9 176 aa11.54□□□□□ -0.56
RER1-209ENST00000605895 LGALS9O00182 355 aa11.54□□□□□ -0.56
RER1-209ENST00000605895 VCYO14598 125 aa11.54□□□□□ -0.56
RER1-209ENST00000605895 LINC00315P59091 139 aa11.54□□□□□ -0.56
RER1-209ENST00000605895 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
RER1-209ENST00000605895 TRBV10-2A0A0K0K1G8 114 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
RER1-209ENST00000605895 UBTD1Q9HAC8 227 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 A0A0J9YXY3 114 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 PAPPA-AS1Q5QFB9 102 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 FAM110DQ8TAY7 271 aaPredicted RBP11.53□□□□□ -0.56
RER1-209ENST00000605895 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 KLK9Q9UKQ9 250 aa11.53□□□□□ -0.56
RER1-209ENST00000605895 TRGV11A0A075B6L2 103 aa11.52□□□□□ -0.56
RER1-209ENST00000605895 P0DMU3 169 aa11.52□□□□□ -0.56
RER1-209ENST00000605895 FAM231AP0DMU4 169 aa11.52□□□□□ -0.56
RER1-209ENST00000605895 FAM231CP0DMU5 169 aa11.52□□□□□ -0.56
RER1-209ENST00000605895 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.56
RER1-209ENST00000605895 CENPVL3A0A0U1RRI6 287 aa11.52□□□□□ -0.57
RER1-209ENST00000605895 ODF3BA8MYP8 253 aa11.52□□□□□ -0.57
RER1-209ENST00000605895 LY6G5BQ8NDX9 201 aa11.52□□□□□ -0.57
RER1-209ENST00000605895 TMEM223A0PJW6 202 aa11.52□□□□□ -0.57
RER1-209ENST00000605895 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
RER1-209ENST00000605895 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
RER1-209ENST00000605895 PRM2P04554 102 aa11.51□□□□□ -0.57
RER1-209ENST00000605895 IGHV3-30-3P0DP02 117 aa11.5□□□□□ -0.57
RER1-209ENST00000605895 Q8N6K4 173 aa11.5□□□□□ -0.57
RER1-209ENST00000605895 LEPROTO15243 131 aa11.5□□□□□ -0.57
RER1-209ENST00000605895 KIF25-AS1Q9Y6Z4 181 aa11.5□□□□□ -0.57
RER1-209ENST00000605895 SAA4P35542 130 aa11.49□□□□□ -0.57
RER1-209ENST00000605895 ITLN2Q8WWU7 325 aaPredicted RBP11.49□□□□□ -0.57
RER1-209ENST00000605895 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
RER1-209ENST00000605895 M0R2P5 195 aa11.49□□□□□ -0.57
RER1-209ENST00000605895 PROK1P58294 105 aa11.49□□□□□ -0.57
RER1-209ENST00000605895 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
RER1-209ENST00000605895 Q9UF83 564 aa11.49□□□□□ -0.57
RER1-209ENST00000605895 M0QXV9 152 aa11.48□□□□□ -0.57
RER1-209ENST00000605895 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
RER1-209ENST00000605895 LY6EQ16553 131 aa11.48□□□□□ -0.57
RER1-209ENST00000605895 A0A0B4J2C4 111 aa11.48□□□□□ -0.57
RER1-209ENST00000605895 IGHV1-69DA0A0B4J2H0 117 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 KNCNA6PVL3 124 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 CDSNQ15517 529 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 TIMM17AQ99595 171 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 VPREB3Q9UKI3 123 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
RER1-209ENST00000605895 I3L3M4 83 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
RER1-209ENST00000605895 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
RER1-209ENST00000605895 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
RER1-209ENST00000605895 CD28P10747 220 aa11.46□□□□□ -0.57
RER1-209ENST00000605895 PIP4P1Q86T03 277 aa11.46□□□□□ -0.57
RER1-209ENST00000605895 NDUFA12Q9UI09 145 aa11.46□□□□□ -0.57
RER1-209ENST00000605895 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.58
RER1-209ENST00000605895 PPP1R17O96001 155 aa11.45□□□□□ -0.58
RER1-209ENST00000605895 COX6CP09669 75 aa11.45□□□□□ -0.58
RER1-209ENST00000605895 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
RER1-209ENST00000605895 IGLV4-3A0A075B6K6 122 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 OVOL1O14753 267 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 C9orf153Q5TBE3 101 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 MRPL53Q96EL3 112 aaKnown RBP11.44□□□□□ -0.58
RER1-209ENST00000605895 LINC01587Q99440 93 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 PF4V1P10720 104 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 Q8NA96 180 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 U3KQE9 123 aa11.44□□□□□ -0.58
RER1-209ENST00000605895 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 M0R1W7 72 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 MINOS1Q5TGZ0 78 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 IGHV4OR15-8A0A075B7B6 117 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 A0A087WW49 117 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 CCL21O00585 134 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 SPINK13Q1W4C9 94 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 TNFRSF18Q9Y5U5 241 aa11.43□□□□□ -0.58
RER1-209ENST00000605895 TRBV27A0A0K0K1C4 114 aa11.42□□□□□ -0.58
RER1-209ENST00000605895 M0QY20 66 aa11.42□□□□□ -0.58
RER1-209ENST00000605895 SETD2Q9BYW2 2564 aaPredicted RBP11.42□□□□□ -0.58
RER1-209ENST00000605895 SMCR5Q8TEV8 140 aa11.42□□□□□ -0.58
RER1-209ENST00000605895 LITAFQ99732 161 aa11.42□□□□□ -0.58
RER1-209ENST00000605895 ATP5J2P56134 94 aa11.41□□□□□ -0.58
RER1-209ENST00000605895 Q6Q795 121 aa11.41□□□□□ -0.58
RER1-209ENST00000605895 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
RER1-209ENST00000605895 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
RER1-209ENST00000605895 YAE1D1Q9NRH1 226 aa11.41□□□□□ -0.58
RER1-209ENST00000605895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
RER1-209ENST00000605895 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
RER1-209ENST00000605895 NXPH4O95158 308 aa11.41□□□□□ -0.58
RER1-209ENST00000605895 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
RER1-209ENST00000605895 SOCS3O14543 225 aa11.4□□□□□ -0.58
RER1-209ENST00000605895 EBI3Q14213 229 aa11.4□□□□□ -0.58
RER1-209ENST00000605895 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.58
RER1-209ENST00000605895 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
RER1-209ENST00000605895 NCOR2Q9Y618 2525 aa11.39□□□□□ -0.59
RER1-209ENST00000605895 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
RER1-209ENST00000605895 USP9YO00507 2555 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms