RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TRBV6-6A0A0A6YYG2 114 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 A0A0J9YY99 117 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 NDUFB3O43676 98 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 GUSBP11Q6P575 273 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 RTTNQ86VV8 2226 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 TRBV27A0A0K0K1C4 114 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 FAM223BA6NKX1 122 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 NDUFC1O43677 76 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 BCE1O60756 84 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 IGKV3-11P04433 115 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 FXYD7P58549 80 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 Q8N2B8 174 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 SLC25A29Q8N8R3 303 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 Q9H3A6 140 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 DNAH14Q0VDD8 3507 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV5-51A0A0C4DH38 117 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 IBA57-AS1B1ANH7 110 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 COX6CP09669 75 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 ARMS2P0C7Q2 107 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV3-43DP0DP04 118 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 C17orf58Q2M2W7 97 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 LINC00322Q6ZN03 302 aaPredicted RBP3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 CCL4L1Q8NHW4 92 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 ZNF71Q9NQZ8 489 aaPredicted RBP3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 LINC00588Q9Y4M8 146 aa3.61□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV1OR15-9A0A0B4J2B8 117 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 TMEM223A0PJW6 202 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 CHTF8P0CG12 524 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 RBM3P98179 157 aaKnown RBP3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 CYSRT1A8MQ03 144 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV3-13P01766 116 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 CD28P10747 220 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 KRTAP10-2P60368 255 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 CIRBPQ14011 172 aaKnown RBP3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 Q1RN00 199 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 MRPL51Q4U2R6 128 aaKnown RBP3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 C10orf128Q5T292 105 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 C16orf47Q6ZP98 133 aaPredicted RBP3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 SDK2Q58EX2 2172 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 FAM208BQ5VWN6 2430 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 NDUFA3O95167 84 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 PRM2P04554 102 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 CMC4P56277 68 aaPredicted RBP3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 UBALD1Q8TB05 177 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 CACNA1BQ00975 2339 aa3.6□□□□□ -1.83
SPTBN1-206ENST00000602898 TRAV3A0A0B4J244 114 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 TRBV6-1A0A0K0K1D8 114 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 PINLYPA6NC86 204 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 C17orf98A8MV24 154 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 NANOS2P60321 138 aaKnown RBP3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 C11orf71Q6IPW1 123 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 DYNAPQ8N1N2 210 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 C20orf197Q8N268 126 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 FAM167A-AS1Q96KT0 104 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 FGF23Q9GZV9 251 aaPredicted RBP3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 KLK15Q9H2R5 256 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 USP24Q9UPU5 2620 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 CHD9Q3L8U1 2897 aa3.59□□□□□ -1.83
SPTBN1-206ENST00000602898 CKS2P33552 79 aa3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 UBE2BP63146 152 aa3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 EIF4EBP1Q13541 118 aaPredicted RBP3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 C2orf83Q53S99 150 aa3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 C17orf82Q86X59 251 aaPredicted RBP3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 PATE1Q8WXA2 126 aa3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 ICOSQ9Y6W8 199 aa3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 ZFHX2Q9C0A1 2572 aaPredicted RBP3.59□□□□□ -1.84
SPTBN1-206ENST00000602898 TRAV13-2A0A0B4J235 113 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 TMEM30CPA0ZSE6 113 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 IGKV3D-11A0A0A0MRZ8 115 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 S100A4P26447 101 aaKnown RBP3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 PLGLAQ15195 96 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 ZNF876PQ49A33 203 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 FAM27BQ5VT28 67 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 SCXQ7RTU7 201 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 PHF5AQ7RTV0 110 aaKnown RBP3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 BRWD1Q9NSI6 2320 aa3.58□□□□□ -1.84
SPTBN1-206ENST00000602898 DNAJC9-AS1A6NH13 148 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 NRACQ8N912 160 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 CHD7Q9P2D1 2997 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 PRSS2P07478 247 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 RNASE4P34096 147 aaKnown RBP3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 ATP5EP2Q5VTU8 51 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 Q86TA4 180 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 DHRS4-AS1Q9P1J3 65 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 DEC1Q9P2X7 70 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 ZNF462Q96JM2 2506 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 TRAV7A0A075B6U4 112 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 IGHV3OR16-10A0A075B7F0 116 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 H7C2G1 150 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 PATE4P0C8F1 98 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 ZNF32P17041 273 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 FUSP35637 526 aaKnown RBP eCLIP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms