RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	CLPSL2	Q6UWE3	100 aa		11.48	□□□□□ -0.57
IRF3-231	ENST00000602190	S100Z	Q8WXG8	99 aa		11.48	□□□□□ -0.57
IRF3-231	ENST00000602190	FMC1	Q96HJ9	113 aa		11.48	□□□□□ -0.57
IRF3-231	ENST00000602190	NDUFA13	Q9P0J0	144 aa		11.48	□□□□□ -0.57
IRF3-231	ENST00000602190	KIF25-AS1	Q9Y6Z4	181 aa		11.48	□□□□□ -0.57
IRF3-231	ENST00000602190	TRAV8-4	A0A0B4J246	113 aa		11.47	□□□□□ -0.57
IRF3-231	ENST00000602190	IFNA7	P01567	189 aa		11.47	□□□□□ -0.57
IRF3-231	ENST00000602190		P01737	135 aa		11.47	□□□□□ -0.57
IRF3-231	ENST00000602190	PRR3	P79522	188 aa	Known RBP	11.47	□□□□□ -0.57
IRF3-231	ENST00000602190	REG3A	Q06141	175 aa		11.47	□□□□□ -0.57
IRF3-231	ENST00000602190	C20orf203	Q8NBC4	194 aa		11.47	□□□□□ -0.57
IRF3-231	ENST00000602190	OR10AG1	Q8NH19	301 aa		11.47	□□□□□ -0.57
IRF3-231	ENST00000602190	hDV102S1	A0JD36	115 aa		11.46	□□□□□ -0.57
IRF3-231	ENST00000602190	SSNA1	O43805	119 aa		11.46	□□□□□ -0.57
IRF3-231	ENST00000602190	ZNF56	Q15929	161 aa		11.46	□□□□□ -0.57
IRF3-231	ENST00000602190	WDR73	Q6P4I2	378 aa		11.46	□□□□□ -0.57
IRF3-231	ENST00000602190	TMSB15B	A0A087X1C1	80 aa		11.45	□□□□□ -0.58
IRF3-231	ENST00000602190	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.45	□□□□□ -0.58
IRF3-231	ENST00000602190	CTXND1	A0A1B0GTU2	59 aa		11.45	□□□□□ -0.58
IRF3-231	ENST00000602190		A0A1B0GUV1	79 aa		11.45	□□□□□ -0.58
IRF3-231	ENST00000602190	GZMB	P10144	247 aa		11.45	□□□□□ -0.58
IRF3-231	ENST00000602190	GAGE6	Q13070	117 aa		11.45	□□□□□ -0.58
IRF3-231	ENST00000602190	TRBV25-1	A0A075B6N4	114 aa		11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	OR5AL1	P0C617	328 aa		11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	UBE2G2	P60604	165 aa		11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	C7orf33	Q8WU49	177 aa		11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	TCEAL7	Q9BRU2	100 aa		11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	GFRA4	Q9GZZ7	299 aa		11.44	□□□□□ -0.58
IRF3-231	ENST00000602190	IGLV10-54	A0A075B6I4	117 aa		11.43	□□□□□ -0.58
IRF3-231	ENST00000602190	FHIT	P49789	147 aa		11.43	□□□□□ -0.58
IRF3-231	ENST00000602190	DERL1	Q9BUN8	251 aa		11.43	□□□□□ -0.58
IRF3-231	ENST00000602190	ZNF471	Q9BX82	626 aa	Predicted RBP	11.43	□□□□□ -0.58
IRF3-231	ENST00000602190	C15orf56	Q8N910	161 aa		11.42	□□□□□ -0.58
IRF3-231	ENST00000602190	AP5S1	Q9NUS5	200 aa		11.42	□□□□□ -0.58
IRF3-231	ENST00000602190	IGLV4-60	A0A075B6I1	120 aa		11.41	□□□□□ -0.58
IRF3-231	ENST00000602190	IGHV1-24	A0A0C4DH33	117 aa		11.41	□□□□□ -0.58
IRF3-231	ENST00000602190	GAS8-AS1	O95177	125 aa		11.41	□□□□□ -0.58
IRF3-231	ENST00000602190	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
IRF3-231	ENST00000602190	MLST8	Q9BVC4	326 aa		11.41	□□□□□ -0.58
IRF3-231	ENST00000602190	UBE2G1	P62253	170 aa		11.4	□□□□□ -0.58
IRF3-231	ENST00000602190	SPINK6	Q6UWN8	80 aa		11.4	□□□□□ -0.58
IRF3-231	ENST00000602190	DPH3P1	Q9H4G8	78 aa		11.4	□□□□□ -0.58
IRF3-231	ENST00000602190		M0QY20	66 aa		11.39	□□□□□ -0.59
IRF3-231	ENST00000602190	NDUFS6	O75380	124 aa	Known RBP	11.38	□□□□□ -0.59
IRF3-231	ENST00000602190	COX6A2	Q02221	97 aa		11.38	□□□□□ -0.59
IRF3-231	ENST00000602190	RPL7L1	Q6DKI1	246 aa	Known RBP	11.38	□□□□□ -0.59
IRF3-231	ENST00000602190	PRSS3P2	Q8NHM4	247 aa		11.38	□□□□□ -0.59
IRF3-231	ENST00000602190	MUC21	A0A0G2JKD1	596 aa		11.37	□□□□□ -0.59
IRF3-231	ENST00000602190	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.37	□□□□□ -0.59
IRF3-231	ENST00000602190	DPH3	Q96FX2	82 aa		11.37	□□□□□ -0.59
IRF3-231	ENST00000602190	LPA	P08519	4548 aa		11.36	□□□□□ -0.59
IRF3-231	ENST00000602190	RPS10	P46783	165 aa	Known RBP	11.36	□□□□□ -0.59
IRF3-231	ENST00000602190	PGLYRP4	Q96LB8	373 aa		11.36	□□□□□ -0.59
IRF3-231	ENST00000602190		Q5BKY6	102 aa		11.35	□□□□□ -0.59
IRF3-231	ENST00000602190	SPANXN1	Q5VSR9	72 aa		11.35	□□□□□ -0.59
IRF3-231	ENST00000602190	REG3G	Q6UW15	175 aa		11.35	□□□□□ -0.59
IRF3-231	ENST00000602190	AP1S3	Q96PC3	154 aa		11.35	□□□□□ -0.59
IRF3-231	ENST00000602190	MAP1LC3B2	A6NCE7	125 aa		11.34	□□□□□ -0.59
IRF3-231	ENST00000602190		F5H697	171 aa		11.34	□□□□□ -0.59
IRF3-231	ENST00000602190	AKR1C3	P42330	323 aa		11.34	□□□□□ -0.59
IRF3-231	ENST00000602190	TMEM243	Q9BU79	118 aa		11.34	□□□□□ -0.59
IRF3-231	ENST00000602190	MAP1LC3B	Q9GZQ8	125 aa		11.34	□□□□□ -0.59
IRF3-231	ENST00000602190	MED28	Q9H204	178 aa		11.34	□□□□□ -0.59
IRF3-231	ENST00000602190	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.33	□□□□□ -0.6
IRF3-231	ENST00000602190	MUC21	A0A140T8X8	626 aa		11.33	□□□□□ -0.6
IRF3-231	ENST00000602190		A6NHS1	94 aa		11.33	□□□□□ -0.6
IRF3-231	ENST00000602190	MAJIN	Q3KP22	176 aa		11.33	□□□□□ -0.6
IRF3-231	ENST00000602190	STPG4	Q8N801	248 aa		11.33	□□□□□ -0.6
IRF3-231	ENST00000602190	GTSF1	Q8WW33	167 aa		11.33	□□□□□ -0.6
IRF3-231	ENST00000602190		A0A096LNI7	61 aa		11.32	□□□□□ -0.6
IRF3-231	ENST00000602190	S100A9	P06702	114 aa	Known RBP	11.32	□□□□□ -0.6
IRF3-231	ENST00000602190	CFAP161	Q6P656	301 aa		11.32	□□□□□ -0.6
IRF3-231	ENST00000602190	ALG5	Q9Y673	324 aa		11.32	□□□□□ -0.6
IRF3-231	ENST00000602190	IGLC6	P0CF74	106 aa		11.31	□□□□□ -0.6
IRF3-231	ENST00000602190	SUMO4	Q6EEV6	95 aa		11.31	□□□□□ -0.6
IRF3-231	ENST00000602190	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.3	□□□□□ -0.6
IRF3-231	ENST00000602190	IGKV2-24	A0A0C4DH68	120 aa		11.3	□□□□□ -0.6
IRF3-231	ENST00000602190		H7C1H1	209 aa		11.3	□□□□□ -0.6
IRF3-231	ENST00000602190	GAGE12H	A6NDE8	117 aa		11.29	□□□□□ -0.6
IRF3-231	ENST00000602190	SMIM17	P0DL12	118 aa		11.29	□□□□□ -0.6
IRF3-231	ENST00000602190	RAB5C	P51148	216 aa		11.29	□□□□□ -0.6
IRF3-231	ENST00000602190	DEFA1	P59665	94 aa		11.29	□□□□□ -0.6
IRF3-231	ENST00000602190	DEFA3	P59666	94 aa		11.29	□□□□□ -0.6
IRF3-231	ENST00000602190	AKR1C8P	Q5T2L2	129 aa		11.29	□□□□□ -0.6
IRF3-231	ENST00000602190	CST9LP1	Q5W188	147 aa		11.28	□□□□□ -0.6
IRF3-231	ENST00000602190	STOML3	Q8TAV4	291 aa		11.28	□□□□□ -0.6
IRF3-231	ENST00000602190	LINC00474	Q9P2X8	69 aa		11.28	□□□□□ -0.6
IRF3-231	ENST00000602190	SCO2	A0A1W2PP80	73 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	PAGE4	O60829	102 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	GIP	P09681	153 aa	Predicted RBP	11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	NKX2-5	P52952	324 aa	Predicted RBP	11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	HIGD2B	Q4VC39	106 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	RASL11A	Q6T310	242 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190		Q6ZRP5	223 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	BAGE2	Q86Y30	109 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	LYPD6B	Q8NI32	183 aa		11.27	□□□□□ -0.61
IRF3-231	ENST00000602190	NIT2	Q9NQR4	276 aa		11.26	□□□□□ -0.61
IRF3-231	ENST00000602190	CYTL1	Q9NRR1	136 aa		11.26	□□□□□ -0.61
IRF3-231	ENST00000602190		G3V3Q6	166 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms