RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 TRBV6-8A0A0A6YYG3 113 aa17.27■□□□□ 0.36
PNKP-216ENST00000601816 RBFOX3A6NFN3 312 aa17.27■□□□□ 0.36
PNKP-216ENST00000601816 IGLC6P0CF74 106 aa17.27■□□□□ 0.36
PNKP-216ENST00000601816 AKAP14Q86UN6 197 aa17.27■□□□□ 0.36
PNKP-216ENST00000601816 KIF25-AS1Q9Y6Z4 181 aa17.27■□□□□ 0.36
PNKP-216ENST00000601816 P01737 135 aa17.26■□□□□ 0.35
PNKP-216ENST00000601816 TAGLN2P37802 199 aaKnown RBP17.26■□□□□ 0.35
PNKP-216ENST00000601816 BIN3Q9NQY0 253 aa17.26■□□□□ 0.35
PNKP-216ENST00000601816 TRBV20OR9-2A0A075B6H5 130 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 IGKV2D-24A0A075B6R9 120 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 XKRY2A2RUG3 117 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 TMEM262E9PQX1 116 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 LECT2O14960 151 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 UBE2WQ96B02 151 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 TMEM70Q9BUB7 260 aa17.25■□□□□ 0.35
PNKP-216ENST00000601816 CACNG7P62955 275 aa17.24■□□□□ 0.35
PNKP-216ENST00000601816 C9orf62Q8N4C0 152 aa17.24■□□□□ 0.35
PNKP-216ENST00000601816 DNAJC30Q96LL9 226 aa17.24■□□□□ 0.35
PNKP-216ENST00000601816 hCG_2014768A0A024R1R8 64 aa17.23■□□□□ 0.35
PNKP-216ENST00000601816 BAALCQ8WXS3 180 aa17.23■□□□□ 0.35
PNKP-216ENST00000601816 MGPP08493 103 aa17.22■□□□□ 0.35
PNKP-216ENST00000601816 FRZBQ92765 325 aa17.22■□□□□ 0.35
PNKP-216ENST00000601816 F2Z2F3 143 aa17.21■□□□□ 0.35
PNKP-216ENST00000601816 TMEM97Q5BJF2 176 aa17.21■□□□□ 0.35
PNKP-216ENST00000601816 CHCHD5Q9BSY4 110 aa17.21■□□□□ 0.35
PNKP-216ENST00000601816 PKIAP61925 76 aa17.2■□□□□ 0.34
PNKP-216ENST00000601816 HAMPP81172 84 aa17.2■□□□□ 0.34
PNKP-216ENST00000601816 Q0VG73 95 aa17.2■□□□□ 0.34
PNKP-216ENST00000601816 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.19■□□□□ 0.34
PNKP-216ENST00000601816 Q5VSD8 79 aa17.19■□□□□ 0.34
PNKP-216ENST00000601816 H7C1H1 209 aa17.18■□□□□ 0.34
PNKP-216ENST00000601816 MPV17L2Q567V2 206 aa17.18■□□□□ 0.34
PNKP-216ENST00000601816 ATRAIDQ6UW56 229 aa17.18■□□□□ 0.34
PNKP-216ENST00000601816 LYZL1Q6UWQ5 148 aa17.18■□□□□ 0.34
PNKP-216ENST00000601816 C15orf54Q8N8G6 183 aa17.18■□□□□ 0.34
PNKP-216ENST00000601816 FAT1Q14517 4588 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 M0QY20 66 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 CRPP02741 224 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 TRGC1P0CF51 173 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 SUMO4Q6EEV6 95 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 ALKAL2Q6UX46 152 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 NTM-AS1Q6ZSK4 140 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 NUDT10Q8NFP7 164 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 NUDT11Q96G61 164 aa17.17■□□□□ 0.34
PNKP-216ENST00000601816 SMR3BP02814 79 aaPredicted RBP17.16■□□□□ 0.34
PNKP-216ENST00000601816 Q8N976 141 aa17.16■□□□□ 0.34
PNKP-216ENST00000601816 ANGP03950 147 aaKnown RBP17.15■□□□□ 0.34
PNKP-216ENST00000601816 BLOC1S1P78537 153 aa17.15■□□□□ 0.34
PNKP-216ENST00000601816 C1orf43Q9BWL3 253 aa17.15■□□□□ 0.34
PNKP-216ENST00000601816 FAM30AQ9NZY2 134 aa17.15■□□□□ 0.34
PNKP-216ENST00000601816 TRBV25-1A0A075B6N4 114 aa17.14■□□□□ 0.33
PNKP-216ENST00000601816 CTRLP40313 264 aa17.14■□□□□ 0.33
PNKP-216ENST00000601816 ENHOQ6UWT2 76 aa17.14■□□□□ 0.33
PNKP-216ENST00000601816 RPP21Q9H633 154 aaKnown RBP17.14■□□□□ 0.33
PNKP-216ENST00000601816 NTF3P20783 257 aa17.13■□□□□ 0.33
PNKP-216ENST00000601816 OCC1Q8TAD7 63 aa17.13■□□□□ 0.33
PNKP-216ENST00000601816 RNASE7Q9H1E1 156 aaKnown RBP17.13■□□□□ 0.33
PNKP-216ENST00000601816 DPH3P1Q9H4G8 78 aa17.13■□□□□ 0.33
PNKP-216ENST00000601816 K7EN84 100 aa17.12■□□□□ 0.33
PNKP-216ENST00000601816 GAGE6Q13070 117 aa17.12■□□□□ 0.33
PNKP-216ENST00000601816 WDR73Q6P4I2 378 aa17.12■□□□□ 0.33
PNKP-216ENST00000601816 RASL11AQ6T310 242 aa17.12■□□□□ 0.33
PNKP-216ENST00000601816 IGHV1-24A0A0C4DH33 117 aa17.11■□□□□ 0.33
PNKP-216ENST00000601816 INAFM2P0DMQ5 153 aa17.11■□□□□ 0.33
PNKP-216ENST00000601816 NKX2-5P52952 324 aaPredicted RBP17.11■□□□□ 0.33
PNKP-216ENST00000601816 IQCJQ1A5X6 159 aa17.11■□□□□ 0.33
PNKP-216ENST00000601816 DNAH8Q96JB1 4490 aa17.11■□□□□ 0.33
PNKP-216ENST00000601816 TMEM250H0YL14 139 aa17.1■□□□□ 0.33
PNKP-216ENST00000601816 FAM229AH3BQW9 127 aa17.1■□□□□ 0.33
PNKP-216ENST00000601816 RBX1P62877 108 aa17.09■□□□□ 0.33
PNKP-216ENST00000601816 TWIST1Q15672 202 aa17.09■□□□□ 0.33
PNKP-216ENST00000601816 CNFNQ9BYD5 112 aa17.09■□□□□ 0.33
PNKP-216ENST00000601816 MIAQ16674 131 aa17.08■□□□□ 0.32
PNKP-216ENST00000601816 Q6ZSA8 131 aa17.08■□□□□ 0.32
PNKP-216ENST00000601816 LYPD6BQ8NI32 183 aa17.08■□□□□ 0.32
PNKP-216ENST00000601816 C14orf177Q52M58 125 aa17.07■□□□□ 0.32
PNKP-216ENST00000601816 NIT2Q9NQR4 276 aa17.07■□□□□ 0.32
PNKP-216ENST00000601816 LINC01620Q4KN68 170 aa17.06■□□□□ 0.32
PNKP-216ENST00000601816 CLPSL2Q6UWE3 100 aa17.06■□□□□ 0.32
PNKP-216ENST00000601816 PRR34Q9NV39 138 aa17.06■□□□□ 0.32
PNKP-216ENST00000601816 VPS13BQ7Z7G8 4022 aa17.05■□□□□ 0.32
PNKP-216ENST00000601816 HLA-DQA1P01909 254 aa17.05■□□□□ 0.32
PNKP-216ENST00000601816 CEBPGP53567 150 aa17.05■□□□□ 0.32
PNKP-216ENST00000601816 LINC00269Q8N2A0 174 aa17.05■□□□□ 0.32
PNKP-216ENST00000601816 TMEM243Q9BU79 118 aa17.05■□□□□ 0.32
PNKP-216ENST00000601816 GTSF1Q8WW33 167 aa17.04■□□□□ 0.32
PNKP-216ENST00000601816 PGLYRP4Q96LB8 373 aa17.04■□□□□ 0.32
PNKP-216ENST00000601816 GATCO43716 136 aaKnown RBP17.03■□□□□ 0.32
PNKP-216ENST00000601816 FAM231DQ6ZW35 169 aa17.02■□□□□ 0.32
PNKP-216ENST00000601816 SMIM15Q7Z3B0 74 aa17.02■□□□□ 0.32
PNKP-216ENST00000601816 USP17L23D6RBM5 183 aa17.01■□□□□ 0.31
PNKP-216ENST00000601816 EIF5A2Q9GZV4 153 aaKnown RBP17.01■□□□□ 0.31
PNKP-216ENST00000601816 A8MWL6 223 aa17■□□□□ 0.31
PNKP-216ENST00000601816 COTL1Q14019 142 aa17■□□□□ 0.31
PNKP-216ENST00000601816 REG3AQ06141 175 aa16.99■□□□□ 0.31
PNKP-216ENST00000601816 GATD1Q8NB37 220 aa16.99■□□□□ 0.31
PNKP-216ENST00000601816 DEFB104AQ8WTQ1 72 aa16.99■□□□□ 0.31
PNKP-216ENST00000601816 TRAV26-2A0A0B4J265 109 aa16.98■□□□□ 0.31
PNKP-216ENST00000601816 UBE2L6O14933 153 aa16.98■□□□□ 0.31
PNKP-216ENST00000601816 AMTP48728 403 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms