RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 KIF25-AS1Q9Y6Z4 181 aa11.24□□□□□ -0.61
NOTCH3-205ENST00000600841 A0A087WX48 190 aa11.23□□□□□ -0.61
NOTCH3-205ENST00000600841 KCNIP4Q6PIL6 250 aa11.23□□□□□ -0.61
NOTCH3-205ENST00000600841 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
NOTCH3-205ENST00000600841 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
NOTCH3-205ENST00000600841 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
NOTCH3-205ENST00000600841 NUDT10Q8NFP7 164 aa11.22□□□□□ -0.61
NOTCH3-205ENST00000600841 NUDT11Q96G61 164 aa11.22□□□□□ -0.61
NOTCH3-205ENST00000600841 CHCHD7Q9BUK0 85 aa11.22□□□□□ -0.61
NOTCH3-205ENST00000600841 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.61
NOTCH3-205ENST00000600841 MGPP08493 103 aa11.21□□□□□ -0.61
NOTCH3-205ENST00000600841 CEBPGP53567 150 aa11.21□□□□□ -0.61
NOTCH3-205ENST00000600841 LYZL1Q6UWQ5 148 aa11.21□□□□□ -0.61
NOTCH3-205ENST00000600841 OCC1Q8TAD7 63 aa11.21□□□□□ -0.61
NOTCH3-205ENST00000600841 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 K7EN84 100 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 TRGC1P0CF51 173 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 ELOBQ15370 118 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 Q8N814 137 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 RMI2Q96E14 147 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 RPP21Q9H633 154 aaKnown RBP11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
NOTCH3-205ENST00000600841 IGLV5-52A0A0A0MRZ9 124 aa11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 H7C1H1 209 aa11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 GCSHP23434 173 aa11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 CTRLP40313 264 aa11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 TMEM97Q5BJF2 176 aa11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 FAM210AQ96ND0 272 aa11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
NOTCH3-205ENST00000600841 M0QY20 66 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 NTF3P20783 257 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 KRTAP10-1P60331 282 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 WDR73Q6P4I2 378 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 Q8N1X5 172 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 UBE2WQ96B02 151 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
NOTCH3-205ENST00000600841 PKIAP61925 76 aa11.17□□□□□ -0.62
NOTCH3-205ENST00000600841 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
NOTCH3-205ENST00000600841 DPH3P1Q9H4G8 78 aa11.17□□□□□ -0.62
NOTCH3-205ENST00000600841 IGKV2D-24A0A075B6R9 120 aa11.16□□□□□ -0.62
NOTCH3-205ENST00000600841 TWIST1Q15672 202 aa11.16□□□□□ -0.62
NOTCH3-205ENST00000600841 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
NOTCH3-205ENST00000600841 LECT2O14960 151 aa11.15□□□□□ -0.62
NOTCH3-205ENST00000600841 RAB14P61106 215 aa11.15□□□□□ -0.62
NOTCH3-205ENST00000600841 Q0VG73 95 aa11.15□□□□□ -0.62
NOTCH3-205ENST00000600841 WFDC2Q14508 124 aa11.15□□□□□ -0.62
NOTCH3-205ENST00000600841 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
NOTCH3-205ENST00000600841 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
NOTCH3-205ENST00000600841 TRBV25-1A0A075B6N4 114 aa11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 BAALCQ8WXS3 180 aa11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
NOTCH3-205ENST00000600841 CRPP02741 224 aa11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 SRP19P09132 144 aaKnown RBP11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 XGP55808 180 aa11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 PEA15Q15121 130 aa11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 ATRAIDQ6UW56 229 aa11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
NOTCH3-205ENST00000600841 IGHV1-24A0A0C4DH33 117 aa11.12□□□□□ -0.63
NOTCH3-205ENST00000600841 A8MWL6 223 aa11.12□□□□□ -0.63
NOTCH3-205ENST00000600841 ANGP03950 147 aaKnown RBP11.12□□□□□ -0.63
NOTCH3-205ENST00000600841 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
NOTCH3-205ENST00000600841 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
NOTCH3-205ENST00000600841 NIT2Q9NQR4 276 aa11.12□□□□□ -0.63
NOTCH3-205ENST00000600841 ZNF727A8MUV8 499 aa11.11□□□□□ -0.63
NOTCH3-205ENST00000600841 GAGE6Q13070 117 aa11.11□□□□□ -0.63
NOTCH3-205ENST00000600841 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
NOTCH3-205ENST00000600841 Q8N976 141 aa11.11□□□□□ -0.63
NOTCH3-205ENST00000600841 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
NOTCH3-205ENST00000600841 RBX1P62877 108 aa11.1□□□□□ -0.63
NOTCH3-205ENST00000600841 CT83Q5H943 113 aa11.1□□□□□ -0.63
NOTCH3-205ENST00000600841 LINC01551Q86U37 167 aa11.1□□□□□ -0.63
NOTCH3-205ENST00000600841 PGLYRP4Q96LB8 373 aa11.1□□□□□ -0.63
NOTCH3-205ENST00000600841 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
NOTCH3-205ENST00000600841 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
NOTCH3-205ENST00000600841 FRZBQ92765 325 aa11.09□□□□□ -0.63
NOTCH3-205ENST00000600841 FAT1Q14517 4588 aa11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 MIAQ16674 131 aa11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 DNAH8Q96JB1 4490 aa11.08□□□□□ -0.64
NOTCH3-205ENST00000600841 TRAV26-2A0A0B4J265 109 aa11.07□□□□□ -0.64
NOTCH3-205ENST00000600841 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
NOTCH3-205ENST00000600841 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
NOTCH3-205ENST00000600841 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
NOTCH3-205ENST00000600841 C9JQL5 133 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 COTL1Q14019 142 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 FAM74A3Q4VXF1 159 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 CLPSL2Q6UWE3 100 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms