RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 H3BNG1 76 aa13.5□□□□□ -0.25
LTBP4-223ENST00000598717 RPL36AP83881 106 aaKnown RBP13.5□□□□□ -0.25
LTBP4-223ENST00000598717 KIAA1644Q3SXP7 199 aa13.5□□□□□ -0.25
LTBP4-223ENST00000598717 OR10J3Q5JRS4 329 aa13.5□□□□□ -0.25
LTBP4-223ENST00000598717 RPL36ALQ969Q0 106 aaKnown RBP13.5□□□□□ -0.25
LTBP4-223ENST00000598717 DNAJC30Q96LL9 226 aa13.5□□□□□ -0.25
LTBP4-223ENST00000598717 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
LTBP4-223ENST00000598717 LOC100131303A0A0U1RQF7 123 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 GAGE12JA6NER3 117 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 GAGE1Q13065 139 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 GAGE4Q13068 117 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 GAGE5Q13069 117 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 GAGE13Q4V321 117 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.49□□□□□ -0.25
LTBP4-223ENST00000598717 NEXN-AS1Q8NBZ9 246 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 ZNRF2Q8NHG8 242 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 MUC7Q8TAX7 377 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 RPL39LQ96EH5 51 aaKnown RBP13.49□□□□□ -0.25
LTBP4-223ENST00000598717 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
LTBP4-223ENST00000598717 KLK5Q9Y337 293 aaPredicted RBP13.49□□□□□ -0.25
LTBP4-223ENST00000598717 MRPL23Q16540 153 aaKnown RBP13.48□□□□□ -0.25
LTBP4-223ENST00000598717 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
LTBP4-223ENST00000598717 TRBV7-3A0A075B6L6 115 aa13.47□□□□□ -0.25
LTBP4-223ENST00000598717 NUDT3O95989 172 aa13.47□□□□□ -0.25
LTBP4-223ENST00000598717 C15orf53Q8NAA6 179 aa13.47□□□□□ -0.25
LTBP4-223ENST00000598717 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
LTBP4-223ENST00000598717 Q9UF83 564 aa13.47□□□□□ -0.25
LTBP4-223ENST00000598717 TNFRSF6BO95407 300 aa13.46□□□□□ -0.25
LTBP4-223ENST00000598717 TRGC2P03986 189 aa13.46□□□□□ -0.25
LTBP4-223ENST00000598717 SRIP30626 198 aa13.46□□□□□ -0.25
LTBP4-223ENST00000598717 ZFAND6Q6FIF0 208 aa13.46□□□□□ -0.25
LTBP4-223ENST00000598717 NRACQ8N912 160 aa13.46□□□□□ -0.25
LTBP4-223ENST00000598717 LAMTOR2Q9Y2Q5 125 aa13.46□□□□□ -0.25
LTBP4-223ENST00000598717 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
LTBP4-223ENST00000598717 PHOX2AO14813 284 aa13.45□□□□□ -0.26
LTBP4-223ENST00000598717 NPYP01303 97 aa13.44□□□□□ -0.26
LTBP4-223ENST00000598717 SH2D6Q7Z4S9 175 aa13.44□□□□□ -0.26
LTBP4-223ENST00000598717 C20orf78Q9BR46 151 aa13.44□□□□□ -0.26
LTBP4-223ENST00000598717 ALKBH7Q9BT30 221 aaPredicted RBP13.44□□□□□ -0.26
LTBP4-223ENST00000598717 A0A096LPF7 62 aa13.43□□□□□ -0.26
LTBP4-223ENST00000598717 UBE2D3P61077 147 aa13.43□□□□□ -0.26
LTBP4-223ENST00000598717 SUMO2P61956 95 aaKnown RBP13.43□□□□□ -0.26
LTBP4-223ENST00000598717 UBE2D2P62837 147 aa13.43□□□□□ -0.26
LTBP4-223ENST00000598717 SDHAF1A6NFY7 115 aa13.42□□□□□ -0.26
LTBP4-223ENST00000598717 NEGR1Q7Z3B1 354 aa13.42□□□□□ -0.26
LTBP4-223ENST00000598717 ATP6V0E2Q8NHE4 81 aa13.42□□□□□ -0.26
LTBP4-223ENST00000598717 MAP1LC3AQ9H492 121 aa13.42□□□□□ -0.26
LTBP4-223ENST00000598717 TGP01266 2768 aa13.41□□□□□ -0.26
LTBP4-223ENST00000598717 LINC00694P0DN24 101 aa13.41□□□□□ -0.26
LTBP4-223ENST00000598717 TCTAP57738 103 aa13.41□□□□□ -0.26
LTBP4-223ENST00000598717 DAZ4Q86SG3 579 aaKnown RBP13.41□□□□□ -0.26
LTBP4-223ENST00000598717 DAZ3Q9NR90 486 aaKnown RBP13.41□□□□□ -0.26
LTBP4-223ENST00000598717 IGHV3-38A0A0C4DH36 116 aa13.4□□□□□ -0.26
LTBP4-223ENST00000598717 PMCHP20382 165 aa13.4□□□□□ -0.26
LTBP4-223ENST00000598717 TMEM70Q9BUB7 260 aa13.4□□□□□ -0.26
LTBP4-223ENST00000598717 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
LTBP4-223ENST00000598717 C3orf84H3BNL1 204 aa13.39□□□□□ -0.27
LTBP4-223ENST00000598717 VCYO14598 125 aa13.39□□□□□ -0.27
LTBP4-223ENST00000598717 POLR2KP53803 58 aaKnown RBP13.39□□□□□ -0.27
LTBP4-223ENST00000598717 I3L3M4 83 aa13.38□□□□□ -0.27
LTBP4-223ENST00000598717 RPL32P62910 135 aaKnown RBP13.38□□□□□ -0.27
LTBP4-223ENST00000598717 SMIM2Q9BVW6 85 aa13.38□□□□□ -0.27
LTBP4-223ENST00000598717 GTSF1LQ9H1H1 148 aa13.38□□□□□ -0.27
LTBP4-223ENST00000598717 APLNQ9ULZ1 77 aa13.38□□□□□ -0.27
LTBP4-223ENST00000598717 DNAH7Q8WXX0 4024 aa13.37□□□□□ -0.27
LTBP4-223ENST00000598717 TRBV27A0A0K0K1C4 114 aa13.37□□□□□ -0.27
LTBP4-223ENST00000598717 PRSS47A8MTI9 375 aa13.37□□□□□ -0.27
LTBP4-223ENST00000598717 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
LTBP4-223ENST00000598717 COTL1Q14019 142 aa13.36□□□□□ -0.27
LTBP4-223ENST00000598717 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
LTBP4-223ENST00000598717 PRSS3P2Q8NHM4 247 aa13.36□□□□□ -0.27
LTBP4-223ENST00000598717 C1orf196B1AJZ1 125 aa13.35□□□□□ -0.27
LTBP4-223ENST00000598717 CASC10Q5T4H9 136 aa13.35□□□□□ -0.27
LTBP4-223ENST00000598717 LYPD5Q6UWN5 251 aa13.35□□□□□ -0.27
LTBP4-223ENST00000598717 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
LTBP4-223ENST00000598717 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
LTBP4-223ENST00000598717 FCER1GP30273 86 aa13.34□□□□□ -0.27
LTBP4-223ENST00000598717 CCL18P55774 89 aa13.34□□□□□ -0.27
LTBP4-223ENST00000598717 IQCJQ1A5X6 159 aa13.34□□□□□ -0.27
LTBP4-223ENST00000598717 Q8N8P6 123 aa13.34□□□□□ -0.27
LTBP4-223ENST00000598717 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
LTBP4-223ENST00000598717 TCAPO15273 167 aa13.33□□□□□ -0.28
LTBP4-223ENST00000598717 IFI27P40305 119 aaPredicted RBP13.33□□□□□ -0.28
LTBP4-223ENST00000598717 ESRGQ1W209 222 aa13.33□□□□□ -0.28
LTBP4-223ENST00000598717 TIRAPP58753 221 aa13.32□□□□□ -0.28
LTBP4-223ENST00000598717 IGLV2-18A0A075B6J9 118 aa13.31□□□□□ -0.28
LTBP4-223ENST00000598717 TRBV6-8A0A0A6YYG3 113 aa13.31□□□□□ -0.28
LTBP4-223ENST00000598717 TSHBP01222 138 aa13.31□□□□□ -0.28
LTBP4-223ENST00000598717 RAB5BP61020 215 aa13.31□□□□□ -0.28
LTBP4-223ENST00000598717 FA2HQ7L5A8 372 aa13.31□□□□□ -0.28
LTBP4-223ENST00000598717 BAGE3Q86Y29 109 aa13.31□□□□□ -0.28
LTBP4-223ENST00000598717 TRBV25-1A0A075B6N4 114 aa13.3□□□□□ -0.28
LTBP4-223ENST00000598717 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
LTBP4-223ENST00000598717 AMTP48728 403 aa13.3□□□□□ -0.28
LTBP4-223ENST00000598717 Q0VG73 95 aa13.3□□□□□ -0.28
LTBP4-223ENST00000598717 LELP1Q5T871 98 aa13.3□□□□□ -0.28
LTBP4-223ENST00000598717 NTM-AS1Q6ZSK4 140 aa13.3□□□□□ -0.28
LTBP4-223ENST00000598717 TRAV8-6A0A0B4J262 113 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BKO60814 126 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms