RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 CITED1Q99966 193 aa11.75□□□□□ -0.53
TRPM4-209ENST00000598502 PRR9Q5T870 116 aa11.74□□□□□ -0.53
TRPM4-209ENST00000598502 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
TRPM4-209ENST00000598502 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
TRPM4-209ENST00000598502 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
TRPM4-209ENST00000598502 EBI3Q14213 229 aa11.74□□□□□ -0.53
TRPM4-209ENST00000598502 MYO9AB2RTY4 2548 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 IGHV4-61A0A0C4DH41 118 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 ELANEP08246 267 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 SLC25A29Q8N8R3 303 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 RBAKDNA6NC62 111 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 IGHV3-33P01772 117 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 CLEC2BQ92478 149 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 NRGNQ92686 78 aa11.73□□□□□ -0.53
TRPM4-209ENST00000598502 LINC01546A6NGU7 62 aa11.72□□□□□ -0.53
TRPM4-209ENST00000598502 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
TRPM4-209ENST00000598502 EEF1AKMT3Q96AZ1 226 aa11.72□□□□□ -0.53
TRPM4-209ENST00000598502 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
TRPM4-209ENST00000598502 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
TRPM4-209ENST00000598502 LINC01619G3V211 115 aa11.72□□□□□ -0.53
TRPM4-209ENST00000598502 ATP5J2P56134 94 aa11.72□□□□□ -0.53
TRPM4-209ENST00000598502 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
TRPM4-209ENST00000598502 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.53
TRPM4-209ENST00000598502 CCL19Q99731 98 aa11.71□□□□□ -0.53
TRPM4-209ENST00000598502 SETD2Q9BYW2 2564 aaPredicted RBP11.71□□□□□ -0.54
TRPM4-209ENST00000598502 SONP18583 2426 aaKnown RBP11.71□□□□□ -0.54
TRPM4-209ENST00000598502 ID1P41134 155 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
TRPM4-209ENST00000598502 TRAV41A0A0B4J266 112 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 COX6B1P14854 86 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 FAM236AA0A1B0GUQ0 79 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 FAM236BA0A1B0GV22 79 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 PF4V1P10720 104 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 C9orf153Q5TBE3 101 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 Q6ZSV7 163 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 C5orf56Q8N8D9 126 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 ZNRF2Q8NHG8 242 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 ZFAND3Q9H8U3 227 aa11.7□□□□□ -0.54
TRPM4-209ENST00000598502 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
TRPM4-209ENST00000598502 CRYGDP07320 174 aa11.69□□□□□ -0.54
TRPM4-209ENST00000598502 SRSF2Q01130 221 aaKnown RBP11.69□□□□□ -0.54
TRPM4-209ENST00000598502 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
TRPM4-209ENST00000598502 ZNF580Q9UK33 172 aa11.69□□□□□ -0.54
TRPM4-209ENST00000598502 H3BUX3 64 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 VCYO14598 125 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 RS1O15537 224 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 LINC00477Q96M19 166 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 CCDC168Q8NDH2 2452 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
TRPM4-209ENST00000598502 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 M0R2P5 195 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 TRIAP1O43715 76 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 EPG5Q9HCE0 2579 aa11.68□□□□□ -0.54
TRPM4-209ENST00000598502 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 PPP1R17O96001 155 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 MAPK1IP1LQ8NDC0 245 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 PRORYQ9H606 182 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 CLPSL1A2RUU4 121 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 DAND5Q8N907 189 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 YAE1D1Q9NRH1 226 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 MOB4Q9Y3A3 225 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 IGHV1-69DA0A0B4J2H0 117 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 IGHV1-69P01742 117 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 BLCAPP62952 87 aa11.67□□□□□ -0.54
TRPM4-209ENST00000598502 IGHV4-30-2A0A087WSY4 118 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 TRGV11A0A075B6L2 103 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 UNQ9165/PRO28630Q6UXU0 137 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 CSMD2Q7Z408 3487 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 IGHV3-73A0A0B4J1V6 119 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 TSHBP01222 138 aa11.66□□□□□ -0.54
TRPM4-209ENST00000598502 SUMO4Q6EEV6 95 aa11.65□□□□□ -0.54
TRPM4-209ENST00000598502 ZNF625Q96I27 306 aaPredicted RBP11.65□□□□□ -0.54
TRPM4-209ENST00000598502 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.55
TRPM4-209ENST00000598502 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
TRPM4-209ENST00000598502 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
TRPM4-209ENST00000598502 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
TRPM4-209ENST00000598502 C20orf173Q96LM9 149 aa11.64□□□□□ -0.55
TRPM4-209ENST00000598502 M0QXV9 152 aa11.64□□□□□ -0.55
TRPM4-209ENST00000598502 TRBV7-1A0A0A6YYK4 115 aa11.64□□□□□ -0.55
TRPM4-209ENST00000598502 LGALS9O00182 355 aa11.64□□□□□ -0.55
TRPM4-209ENST00000598502 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 ICOSQ9Y6W8 199 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 A8MZ25 164 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 TMEM141Q96I45 108 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 PSMG3-AS1Q96PY0 264 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
TRPM4-209ENST00000598502 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
TRPM4-209ENST00000598502 CD28P10747 220 aa11.62□□□□□ -0.55
TRPM4-209ENST00000598502 LOC107984640A0A0U1RRK4 108 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms