RNA–Protein interactions for RNA: ENST00000597198.5

IRF3-217, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IRF3, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-217ENST00000597198 RIGQ13278 110 aa11.21□□□□□ -0.61
IRF3-217ENST00000597198 SUMO4Q6EEV6 95 aa11.21□□□□□ -0.61
IRF3-217ENST00000597198 RNF185Q96GF1 192 aa11.21□□□□□ -0.61
IRF3-217ENST00000597198 EPPK1P58107 5090 aaKnown RBP11.21□□□□□ -0.61
IRF3-217ENST00000597198 RPS10P46783 165 aaKnown RBP11.21□□□□□ -0.62
IRF3-217ENST00000597198 S100A8P05109 93 aa11.2□□□□□ -0.62
IRF3-217ENST00000597198 MGPP08493 103 aa11.2□□□□□ -0.62
IRF3-217ENST00000597198 ESRGQ1W209 222 aa11.2□□□□□ -0.62
IRF3-217ENST00000597198 MRPL54Q6P161 138 aaKnown RBP11.2□□□□□ -0.62
IRF3-217ENST00000597198 ATP5L2Q7Z4Y8 100 aa11.2□□□□□ -0.62
IRF3-217ENST00000597198 NEXN-AS1Q8NBZ9 246 aa11.2□□□□□ -0.62
IRF3-217ENST00000597198 A0A1B0GW15 77 aa11.19□□□□□ -0.62
IRF3-217ENST00000597198 F5H697 171 aa11.19□□□□□ -0.62
IRF3-217ENST00000597198 SRIP30626 198 aa11.19□□□□□ -0.62
IRF3-217ENST00000597198 HBBP68871 147 aa11.19□□□□□ -0.62
IRF3-217ENST00000597198 LINC00588Q9Y4M8 146 aa11.19□□□□□ -0.62
IRF3-217ENST00000597198 TRBV24-1A0A075B6N3 115 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 TGIF2-C20orf24A0A0A6YYL0 155 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 RAB4AP20338 218 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 GAGE1Q13065 139 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 GAGE4Q13068 117 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 GAGE5Q13069 117 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 URGCP-MRPS24S4R325 110 aa11.18□□□□□ -0.62
IRF3-217ENST00000597198 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 GAS8-AS1O95177 125 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 CAMPP49913 170 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 UBE2D3P61077 147 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 UBE2D2P62837 147 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
IRF3-217ENST00000597198 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 TIRAPP58753 221 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 FAM104BQ5XKR9 115 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 SH2D6Q7Z4S9 175 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 FRZBQ92765 325 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 C12orf57Q99622 126 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 DNAH6Q9C0G6 4158 aa11.16□□□□□ -0.62
IRF3-217ENST00000597198 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
IRF3-217ENST00000597198 UPK3BQ9BT76 320 aa11.15□□□□□ -0.62
IRF3-217ENST00000597198 H7C1H1 209 aa11.15□□□□□ -0.63
IRF3-217ENST00000597198 LY6G6CO95867 125 aa11.15□□□□□ -0.63
IRF3-217ENST00000597198 SMIM6P0DI80 62 aa11.15□□□□□ -0.63
IRF3-217ENST00000597198 CCL18P55774 89 aa11.15□□□□□ -0.63
IRF3-217ENST00000597198 RPL36AP83881 106 aaKnown RBP11.15□□□□□ -0.63
IRF3-217ENST00000597198 KCNIP4Q6PIL6 250 aa11.15□□□□□ -0.63
IRF3-217ENST00000597198 ATP6V0E2Q8NHE4 81 aa11.15□□□□□ -0.63
IRF3-217ENST00000597198 RPL36ALQ969Q0 106 aaKnown RBP11.15□□□□□ -0.63
IRF3-217ENST00000597198 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.63
IRF3-217ENST00000597198 S100PP25815 95 aa11.14□□□□□ -0.63
IRF3-217ENST00000597198 RPL39LQ96EH5 51 aaKnown RBP11.14□□□□□ -0.63
IRF3-217ENST00000597198 NIT2Q9NQR4 276 aa11.14□□□□□ -0.63
IRF3-217ENST00000597198 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
IRF3-217ENST00000597198 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
IRF3-217ENST00000597198 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
IRF3-217ENST00000597198 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
IRF3-217ENST00000597198 TRGC2P03986 189 aa11.12□□□□□ -0.63
IRF3-217ENST00000597198 NRACQ8N912 160 aa11.12□□□□□ -0.63
IRF3-217ENST00000597198 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BKO60814 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 S100A12P80511 92 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
IRF3-217ENST00000597198 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
IRF3-217ENST00000597198 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
IRF3-217ENST00000597198 PHOX2AO14813 284 aa11.1□□□□□ -0.63
IRF3-217ENST00000597198 NCR2O95944 276 aa11.1□□□□□ -0.63
IRF3-217ENST00000597198 NDUFA6P56556 154 aa11.1□□□□□ -0.63
IRF3-217ENST00000597198 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
IRF3-217ENST00000597198 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
IRF3-217ENST00000597198 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
IRF3-217ENST00000597198 TNFRSF18Q9Y5U5 241 aa11.09□□□□□ -0.63
IRF3-217ENST00000597198 DNAH2Q9P225 4427 aa11.09□□□□□ -0.63
IRF3-217ENST00000597198 IGHV3-38A0A0C4DH36 116 aa11.09□□□□□ -0.63
IRF3-217ENST00000597198 LELP1Q5T871 98 aa11.09□□□□□ -0.63
IRF3-217ENST00000597198 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
IRF3-217ENST00000597198 WFDC10BQ8IUB3 73 aa11.08□□□□□ -0.64
IRF3-217ENST00000597198 D6R8Y8 96 aa11.07□□□□□ -0.64
IRF3-217ENST00000597198 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
IRF3-217ENST00000597198 Q9H8V8 135 aa11.07□□□□□ -0.64
IRF3-217ENST00000597198 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
IRF3-217ENST00000597198 POLR2KP53803 58 aaKnown RBP11.06□□□□□ -0.64
IRF3-217ENST00000597198 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
IRF3-217ENST00000597198 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
IRF3-217ENST00000597198 PCP4L1A6NKN8 68 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms