RNA–Protein interactions for RNA: ENST00000596250.5

SOX2-OT-225, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 610 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-225ENST00000596250 TMEM88Q6PEY1 159 aa9.56□□□□□ -0.88
SOX2-OT-225ENST00000596250 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
SOX2-OT-225ENST00000596250 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
SOX2-OT-225ENST00000596250 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
SOX2-OT-225ENST00000596250 RYR2Q92736 4967 aa9.56□□□□□ -0.88
SOX2-OT-225ENST00000596250 TRBV24-1A0A075B6N3 115 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 PPBPP02775 128 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 GYPEP15421 78 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 RAB4AP20338 218 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 LGALS9CQ6DKI2 356 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 KIF25-AS1Q9Y6Z4 181 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 NACAE9PAV3 2078 aa9.55□□□□□ -0.88
SOX2-OT-225ENST00000596250 APCSP02743 223 aa9.54□□□□□ -0.88
SOX2-OT-225ENST00000596250 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
SOX2-OT-225ENST00000596250 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
SOX2-OT-225ENST00000596250 TRAPPC1Q9Y5R8 145 aa9.54□□□□□ -0.88
SOX2-OT-225ENST00000596250 TRBV7-3A0A075B6L6 115 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 SUMO4Q6EEV6 95 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 CBLN2Q8IUK8 224 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 ORMDL3Q8N138 153 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 GATD1Q8NB37 220 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 ZNRF2Q8NHG8 242 aa9.53□□□□□ -0.88
SOX2-OT-225ENST00000596250 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 GAGE12JA6NER3 117 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 FABP9Q0Z7S8 132 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 GAGE1Q13065 139 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 GAGE4Q13068 117 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 GAGE5Q13069 117 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 NEGR1Q7Z3B1 354 aa9.52□□□□□ -0.89
SOX2-OT-225ENST00000596250 M0QY20 66 aa9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 CCL18P55774 89 aa9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 TMEM97Q5BJF2 176 aa9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 ATP6V0E2Q8NHE4 81 aa9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 MRPL18Q9H0U6 180 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 HYDINQ4G0P3 5121 aa9.51□□□□□ -0.89
SOX2-OT-225ENST00000596250 TRAV26-2A0A0B4J265 109 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 D6R8Y8 96 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 LINC00315P59091 139 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 RNF185Q96GF1 192 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 LAMTOR2Q9Y2Q5 125 aa9.5□□□□□ -0.89
SOX2-OT-225ENST00000596250 Q6ZSN1 163 aa9.49□□□□□ -0.89
SOX2-OT-225ENST00000596250 NEXN-AS1Q8NBZ9 246 aa9.49□□□□□ -0.89
SOX2-OT-225ENST00000596250 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
SOX2-OT-225ENST00000596250 A0A096LPF7 62 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 PHOX2AO14813 284 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 SCO1O75880 301 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 P0DMU3 169 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 PMCHP20382 165 aa9.48□□□□□ -0.89
SOX2-OT-225ENST00000596250 LOC100131303A0A0U1RQF7 123 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 TCAPO15273 167 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 NCR2O95944 276 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 KIR2DL4Q99706 377 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
SOX2-OT-225ENST00000596250 TRAV8-6A0A0B4J262 113 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 I3L3M4 83 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 VCYO14598 125 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 TNFRSF6BO95407 300 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 COTL1Q14019 142 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-225ENST00000596250 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
SOX2-OT-225ENST00000596250 RAB5AP20339 215 aa9.45□□□□□ -0.9
SOX2-OT-225ENST00000596250 FCER1GP30273 86 aa9.45□□□□□ -0.9
SOX2-OT-225ENST00000596250 UBE2D3P61077 147 aa9.45□□□□□ -0.9
SOX2-OT-225ENST00000596250 UBE2D2P62837 147 aa9.45□□□□□ -0.9
SOX2-OT-225ENST00000596250 COLCA2A8K830 154 aa9.44□□□□□ -0.9
SOX2-OT-225ENST00000596250 YPEL4Q96NS1 127 aa9.44□□□□□ -0.9
SOX2-OT-225ENST00000596250 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
SOX2-OT-225ENST00000596250 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
SOX2-OT-225ENST00000596250 TRBV25-1A0A075B6N4 114 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 UBE2L6O14933 153 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 PKIAP61925 76 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 TMEM18Q96B42 140 aa9.43□□□□□ -0.9
SOX2-OT-225ENST00000596250 NPYP01303 97 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms