RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DNAH10OSP0CZ25 163 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 NUP35Q8NFH5 326 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 DNAH17Q9UFH2 4485 aa9.34□□□□□ -0.91
SHKBP1-207ENST00000595631 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
SHKBP1-207ENST00000595631 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
SHKBP1-207ENST00000595631 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
SHKBP1-207ENST00000595631 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
SHKBP1-207ENST00000595631 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
SHKBP1-207ENST00000595631 A0A1B0GVY2 172 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 ADCYAP1P18509 176 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 TNP2Q05952 138 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 LINC01556Q5JQF7 62 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 GATD1Q8NB37 220 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 DEFB104AQ8WTQ1 72 aa9.32□□□□□ -0.92
SHKBP1-207ENST00000595631 A0A087WWC5 75 aa9.31□□□□□ -0.92
SHKBP1-207ENST00000595631 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
SHKBP1-207ENST00000595631 H7C1H1 209 aa9.31□□□□□ -0.92
SHKBP1-207ENST00000595631 SMIM15Q7Z3B0 74 aa9.31□□□□□ -0.92
SHKBP1-207ENST00000595631 RPL39LQ96EH5 51 aaKnown RBP9.31□□□□□ -0.92
SHKBP1-207ENST00000595631 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
SHKBP1-207ENST00000595631 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 TRAV9-2A0A087WT02 112 aa9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 NTM-AS1Q6ZSK4 140 aa9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 DNAJC30Q96LL9 226 aa9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
SHKBP1-207ENST00000595631 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 RIGQ13278 110 aa9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 UQCC3Q6UW78 93 aa9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 DAZ4Q86SG3 579 aaKnown RBP9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 DAZ3Q9NR90 486 aaKnown RBP9.29□□□□□ -0.92
SHKBP1-207ENST00000595631 TMEM218A2RU14 115 aa9.28□□□□□ -0.92
SHKBP1-207ENST00000595631 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
SHKBP1-207ENST00000595631 NIT1Q86X76 327 aa9.28□□□□□ -0.92
SHKBP1-207ENST00000595631 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
SHKBP1-207ENST00000595631 SLC7A5P1Q8MH63 180 aa9.28□□□□□ -0.92
SHKBP1-207ENST00000595631 Q9HAA7 133 aa9.28□□□□□ -0.92
SHKBP1-207ENST00000595631 IBA57-AS1B1ANH7 110 aa9.27□□□□□ -0.93
SHKBP1-207ENST00000595631 F8W036 122 aa9.27□□□□□ -0.93
SHKBP1-207ENST00000595631 CAMPP49913 170 aa9.27□□□□□ -0.93
SHKBP1-207ENST00000595631 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
SHKBP1-207ENST00000595631 C10orf126Q8N4M7 172 aa9.27□□□□□ -0.93
SHKBP1-207ENST00000595631 PKD1P98161 4303 aa9.27□□□□□ -0.93
SHKBP1-207ENST00000595631 SMKR1H3BMG3 65 aa9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 K7EP13 123 aa9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 NCR2O95944 276 aa9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 BTF3P20290 206 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 RAB4AP20338 218 aa9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 S100A1P23297 94 aa9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 RPS10P46783 165 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
SHKBP1-207ENST00000595631 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
SHKBP1-207ENST00000595631 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
SHKBP1-207ENST00000595631 GAGE6Q13070 117 aa9.25□□□□□ -0.93
SHKBP1-207ENST00000595631 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
SHKBP1-207ENST00000595631 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
SHKBP1-207ENST00000595631 HECTD4Q9Y4D8 3996 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 A0A1B0GXF2 115 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 MT-ND4LP03901 98 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 NFE4Q86UQ8 179 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 ANAPC16Q96DE5 110 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
SHKBP1-207ENST00000595631 A0A087WX48 190 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 IGHV1-24A0A0C4DH33 117 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 SDHAF1A6NFY7 115 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 ATP6V1G1O75348 118 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 IQCJQ1A5X6 159 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 MRPL51Q4U2R6 128 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 TMEM97Q5BJF2 176 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 ATRAIDQ6UW56 229 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 Q8N976 141 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 FRZBQ92765 325 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 SEC11CQ9BY50 192 aa9.23□□□□□ -0.93
SHKBP1-207ENST00000595631 HBBP68871 147 aa9.22□□□□□ -0.93
SHKBP1-207ENST00000595631 FAM104BQ5XKR9 115 aa9.22□□□□□ -0.93
SHKBP1-207ENST00000595631 KCNIP4Q6PIL6 250 aa9.22□□□□□ -0.93
SHKBP1-207ENST00000595631 TRBV6-5A0A0K0K1A5 114 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 A0A1B0GW15 77 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 FUSP35637 526 aaKnown RBP eCLIP9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 AMTP48728 403 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 COTL1Q14019 142 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 LAGE3Q14657 143 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 NRACQ8N912 160 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 TMEM243Q9BU79 118 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 ST20Q9HBF5 79 aa9.21□□□□□ -0.94
SHKBP1-207ENST00000595631 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
SHKBP1-207ENST00000595631 RBX1P62877 108 aa9.2□□□□□ -0.94
SHKBP1-207ENST00000595631 C10orf91Q5T1B1 145 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms