RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 Q6ZR54 194 aa11.82□□□□□ -0.52
LTBP4-209ENST00000594116 CBLN2Q8IUK8 224 aa11.82□□□□□ -0.52
LTBP4-209ENST00000594116 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
LTBP4-209ENST00000594116 HHLA3Q9XRX5 114 aa11.82□□□□□ -0.52
LTBP4-209ENST00000594116 TRBV24-1A0A075B6N3 115 aa11.81□□□□□ -0.52
LTBP4-209ENST00000594116 H3BNG1 76 aa11.81□□□□□ -0.52
LTBP4-209ENST00000594116 MGPP08493 103 aa11.81□□□□□ -0.52
LTBP4-209ENST00000594116 SLC25A29Q8N8R3 303 aa11.81□□□□□ -0.52
LTBP4-209ENST00000594116 RNF185Q96GF1 192 aa11.81□□□□□ -0.52
LTBP4-209ENST00000594116 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 K7EQD1 137 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 RAB4AP20338 218 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 SUMO4Q6EEV6 95 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 FRZBQ92765 325 aa11.8□□□□□ -0.52
LTBP4-209ENST00000594116 PKD1P98161 4303 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 PAX4O43316 350 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 RHOHQ15669 191 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 COX19Q49B96 90 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
LTBP4-209ENST00000594116 A0A0J9YY99 117 aa11.78□□□□□ -0.52
LTBP4-209ENST00000594116 F5H697 171 aa11.78□□□□□ -0.52
LTBP4-209ENST00000594116 TMEM136Q6ZRR5 245 aa11.78□□□□□ -0.52
LTBP4-209ENST00000594116 PRADC1Q9BSG0 188 aa11.78□□□□□ -0.52
LTBP4-209ENST00000594116 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
LTBP4-209ENST00000594116 M0QY20 66 aa11.77□□□□□ -0.53
LTBP4-209ENST00000594116 SCO1O75880 301 aa11.77□□□□□ -0.53
LTBP4-209ENST00000594116 MRAP2Q96G30 205 aa11.77□□□□□ -0.53
LTBP4-209ENST00000594116 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
LTBP4-209ENST00000594116 H7C1H1 209 aa11.76□□□□□ -0.53
LTBP4-209ENST00000594116 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
LTBP4-209ENST00000594116 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
LTBP4-209ENST00000594116 TRAV26-2A0A0B4J265 109 aa11.75□□□□□ -0.53
LTBP4-209ENST00000594116 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
LTBP4-209ENST00000594116 GYPEP15421 78 aa11.75□□□□□ -0.53
LTBP4-209ENST00000594116 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
LTBP4-209ENST00000594116 Q9UF83 564 aa11.75□□□□□ -0.53
LTBP4-209ENST00000594116 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
LTBP4-209ENST00000594116 MT-ND6P03923 174 aa11.74□□□□□ -0.53
LTBP4-209ENST00000594116 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
LTBP4-209ENST00000594116 ICOSQ9Y6W8 199 aa11.74□□□□□ -0.53
LTBP4-209ENST00000594116 A0A096LPF7 62 aa11.73□□□□□ -0.53
LTBP4-209ENST00000594116 C1orf134Q5TEV5 83 aa11.73□□□□□ -0.53
LTBP4-209ENST00000594116 DNAJC30Q96LL9 226 aa11.73□□□□□ -0.53
LTBP4-209ENST00000594116 COLCA2A8K830 154 aa11.72□□□□□ -0.53
LTBP4-209ENST00000594116 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
LTBP4-209ENST00000594116 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
LTBP4-209ENST00000594116 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
LTBP4-209ENST00000594116 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
LTBP4-209ENST00000594116 NIT2Q9NQR4 276 aa11.72□□□□□ -0.53
LTBP4-209ENST00000594116 DYNC1H1Q14204 4646 aaKnown RBP11.72□□□□□ -0.53
LTBP4-209ENST00000594116 TRBV7-3A0A075B6L6 115 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 GAGE12JA6NER3 117 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 SMKR1H3BMG3 65 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 NCR2O95944 276 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 NUDT3O95989 172 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 PPBPP02775 128 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 RPS10P46783 165 aaKnown RBP11.71□□□□□ -0.53
LTBP4-209ENST00000594116 GAGE1Q13065 139 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 GAGE4Q13068 117 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 GAGE5Q13069 117 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 GAGE13Q4V321 117 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 NRACQ8N912 160 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.53
LTBP4-209ENST00000594116 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
LTBP4-209ENST00000594116 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 D6R8Y8 96 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 APCSP02743 223 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 SRIP30626 198 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 CKS2P33552 79 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 UBE2D3P61077 147 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 UBE2D2P62837 147 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 SH2D6Q7Z4S9 175 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 ORMDL3Q8N138 153 aa11.7□□□□□ -0.54
LTBP4-209ENST00000594116 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
LTBP4-209ENST00000594116 PPP1R17O96001 155 aa11.69□□□□□ -0.54
LTBP4-209ENST00000594116 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
LTBP4-209ENST00000594116 NEGR1Q7Z3B1 354 aa11.69□□□□□ -0.54
LTBP4-209ENST00000594116 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
LTBP4-209ENST00000594116 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
LTBP4-209ENST00000594116 PHOX2AO14813 284 aa11.68□□□□□ -0.54
LTBP4-209ENST00000594116 CCL18P55774 89 aa11.68□□□□□ -0.54
LTBP4-209ENST00000594116 LAMTOR2Q9Y2Q5 125 aa11.68□□□□□ -0.54
LTBP4-209ENST00000594116 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
LTBP4-209ENST00000594116 NPYP01303 97 aa11.67□□□□□ -0.54
LTBP4-209ENST00000594116 ATP6V0E2Q8NHE4 81 aa11.67□□□□□ -0.54
LTBP4-209ENST00000594116 TNFRSF6BO95407 300 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 RAB5AP20339 215 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 TIRAPP58753 221 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 PRELID3AQ96N28 172 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 ST20Q9HBF5 79 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 LINC00588Q9Y4M8 146 aa11.66□□□□□ -0.54
LTBP4-209ENST00000594116 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
LTBP4-209ENST00000594116 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
LTBP4-209ENST00000594116 DAZ4Q86SG3 579 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms